Protein Concepts Dictionary

Tableau information

Concept source:  d2dv7a_  amino acid (a.a.) range (MET1)(VAL263)

nSSEs in this Concept: 24

String of secondary struct.elems. (SSEs) defining this concept: EHHEHEHHHEHHEHEHEHEEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)    (GLY9) E1
	   (ASP12)   (THR17) H2
	   (LEU21)   (CYS27) H3
	   (TYR29)   (TYR35) E4
	   (THR43)   (ILE51) H5
	   (GLU54)   (SER59) E6
	   (SER59)   (VAL63) H7
	   (VAL63)   (PHE67) H8
	   (VAL71)   (GLU77) H9
	   (ASP79)   (PRO85) E10
	   (ASP87)   (THR92) H11
	   (THR92)  (GLY105) H12
	  (GLU107)  (HIS112) E13
	  (SER118)  (GLY124) H14
	  (LYS132)  (TYR138) E15
	  (SER147)  (GLY159) H16
	  (LEU160)  (LEU166) E17
	  (THR177)  (LYS193) H18
	  (VAL203)  (ARG208) E19
	  (PRO214)  (GLY219) E20
	  (VAL221)  (GLU227) H21
	  (PRO233)  (VAL238) E22
	  (ILE244)  (GLY255) H23
	  (PRO257)  (VAL263) H24

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                                      
H2      122.0°   H2                                                                                                                                                               
H3     -136.5°  101.5°   H3                                                                                                                                                        
E4      -39.3°  115.5° -122.6°   E4                                                                                                                                                 
H5      129.1°  -40.5°  -83.9°  151.0°   H5                                                                                                                                          
E6      -76.2°   96.2°  100.4°  -37.0°  135.6°   E6                                                                                                                                   
H7     -132.1°  -16.2°   90.1° -114.1°   48.5°  -87.1°   H7                                                                                                                            
H8     -162.9°  -46.6°   57.0° -150.8°  -34.0°  114.8°  -41.2°   H8                                                                                                                     
H9      121.2°  -49.5°   86.3° -151.0°  -10.9° -145.5°  -59.0°  -42.5°   H9                                                                                                              
E10     -20.2°  121.3° -131.3°  -19.1°  144.0°  -56.1° -125.4° -166.5° -138.5°   E10                                                                                                      
H11      79.0°  103.1°  -91.6°   40.0° -140.2°   10.1°  -92.2° -114.2° -151.0°   58.9°   H11                                                                                               
H12    -171.5°  -56.3°   46.2°  148.9°  -43.4°  112.0°   48.7°  -10.9°  -50.8°  168.0° -109.4°   H12                                                                                        
E13     -11.7°  115.8° -141.3°  -49.9°  117.6°  -86.3° -128.5°  151.6°  109.5°  -31.2°  -89.9° -160.1°   E13                                                                                 
H14     -19.6°  106.2° -149.8°  -53.9°  109.8°  -88.6° -119.3°  143.4°  102.6°  -36.5°  -93.7° -153.2°   -9.7°   H14                                                                          
E15      79.7° -156.8°  -57.3°   75.0° -133.7°  -80.3° -141.5° -114.2°  129.4°   75.8°  -71.0° -103.5°   87.0°   96.6°   E15                                                                   
H16     -69.2°   54.6°  152.0°  -83.9°   68.4°   97.0°   68.9°   95.7°  -67.2°  -76.7°  107.0°  106.6°  -61.4°  -51.8° -148.4°   H16                                                            
E17     106.2° -131.0°  -31.4° -106.9° -102.1° -103.7° -121.3°   84.5°   99.4°  106.8°  -93.5°   74.7°  109.9°  118.5°  -32.0° -157.2°   E17                                                     
H18     -84.4°  -76.9°  106.8°   48.5° -116.9°   19.5°  -69.0° -102.3° -126.4°  -66.0°   28.2°  102.7°  -92.1°  -91.2°   99.2°  -83.5°  118.9°   H18                                              
E19     122.0°   96.0°  -46.3° -148.4°   58.1° -146.3°   96.5°   56.4°   53.4° -137.0° -136.8°   52.4°  115.9°  117.7°  -76.2°  115.7°  -46.5°  150.9°   E19                                       
E20     -52.8°  -93.9°  129.7°   21.9° -131.9°   29.8°  -92.5° -131.6° -136.1°   35.5°   38.1° -133.9°  -60.5°  -60.6°   94.0°  -71.7°  124.4°  -31.7°  170.0°   E20                                
H21     111.1° -118.5°  -37.0° -125.2°   82.7° -126.1°  114.9°   73.9°   78.3° -119.3° -115.9°   66.5°  110.0°  115.9°  -51.3°  136.4°  -22.5° -139.8°   24.9°  145.3°   H21                         
E22     -66.9°   65.7°  141.3°   50.2° -102.3°   49.1°  -68.2° -109.4° -106.9°   57.2°   59.2° -116.2°  -69.1°  -64.0°  123.6°  -48.1°  152.4°  -36.3°  160.2°  -29.6° -174.8°   E22                  
H23     -75.5°  150.0°  -65.9°  -93.4°  109.6° -112.5°  150.8°  109.7°  101.2°  -83.8° -104.3°  102.6°   76.3°   84.0°  -35.0° -126.3°   35.3° -132.0°   55.1° -115.3°   36.1° -140.9°   H23           
H24    -109.5°  -18.6°  112.5°   97.1°  -58.7°   79.5°  -22.7°  -62.5°  -66.8°  104.5°   87.6°  -70.9° -106.3°  -97.5°  155.0°   49.7° -143.8°   60.0° -114.5°   75.3° -136.1°   47.8° -168.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2e15a_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2huqa_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2dxwa_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2e08a_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2pb4a_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2owga_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2e17a_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2p2xa_ :     (LEU3)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2eh2a_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2el1a_ :     (LEU3)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2p5fa_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2pcma_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2eeqa_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2dv4a_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2p6ia_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2dv7a_ :     (MET1)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.90