Tableau information
Concept source: d1mm6a_ amino acid (a.a.) range (LYS4)(GLY259)
nSSEs in this Concept: 24
String of secondary struct.elems. (SSEs) defining this concept: EHHEEEHEHEEEHEHHHEHEEEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS4) (THR10) E1
(GLU13) (MET18) H2
(GLY34) (GLY48) H3
(LYS50) (ILE55) E4
(TYR61) (ASP67) E5
(LYS69) (GLY73) E6
(GLY73) (GLY81) H7
(ASP84) (ALA88) E8
(LEU94) (ILE100) H9
(ILE100) (LYS104) E10
(MET107) (ILE111) E11
(ILE111) (LYS116) E12
(ALA124) (GLN130) H13
(GLU132) (LEU138) E14
(SER142) (ARG148) H15
(ALA153) (ALA165) H16
(THR174) (ARG182) H17
(LYS187) (LEU192) E18
(SER194) (ARG203) H19
(ASP207) (GLY213) E20
(ASP216) (ILE222) E21
(ILE222) (PRO225) E22
(LEU230) (GLY245) H23
(LEU247) (GLY259) H24
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -148.6° H2
H3 155.4° -53.9° H3
E4 -26.3° -138.6° 156.8° E4
E5 80.2° -119.0° -94.5° 62.5° E5
E6 92.9° -59.9° -99.7° -103.2° 158.6° E6
H7 155.7° 53.0° -26.0° 136.2° -76.1° -111.3° H7
E8 -32.3° 125.0° 140.8° -55.5° -112.1° 65.1° -166.8° E8
H9 164.7° -32.1° -36.3° 138.5° 90.1° -91.9° 22.3° -156.9° H9
E10 -83.1° 90.2° 88.4° -108.5° -145.6° 51.5° 113.9° -53.4° -111.1° E10
E11 29.1° -150.4° -143.0° 15.5° -51.8° 117.1° -127.9° 61.4° 138.0° -110.7° E11
E12 -52.7° 96.1° 148.9° -52.1° -109.2° 52.4° 142.4° 46.6° 121.4° 83.3° 67.2° E12
H13 53.5° -123.2° -133.1° 27.7° -42.1° 118.4° -109.1° 83.1° 111.7° 136.3° -28.7° 67.1° H13
E14 174.2° 35.8° -23.6° 149.7° -94.0° -92.7° 18.6° -153.3° -13.0° 101.6° -145.3° 130.8° -122.1° E14
H15 55.0° 156.2° 104.3° 58.2° 46.6° 141.6° -103.3° -77.4° 124.8° -99.5° -43.1° -106.6° -62.2° -120.4° H15
H16 88.9° -74.1° -113.1° 66.4° -75.1° 84.6° -90.4° 101.7° -77.1° 134.5° 76.3° 57.3° 50.6° -90.1° -112.1° H16
H17 19.9° -130.7° 156.9° -39.6° 99.3° 73.0° 175.5° -16.5° -160.2° -69.8° 47.5° -39.0° 66.9° -165.7° 73.2° 88.5° H17
E18 155.6° 52.5° 3.4° 160.1° 97.9° -96.6° 28.8° -138.1° -37.2° 85.3° -145.9° 146.5° -136.5° -24.3° 106.3° -114.3° -154.4° E18
H19 -69.9° 79.0° 127.8° -74.4° -131.0° 29.7° 131.4° 51.6° 109.2° 68.6° 89.1° 22.7° 89.2° 114.9° -124.8° 66.6° -51.8° 124.9° H19
E20 94.1° -115.6° -62.0° 103.4° 68.6° -132.5° -72.1° -100.6° -93.3° -83.0° 88.4° 145.3° -103.1° -83.3° 45.3° -142.4° 106.3° -63.2° -148.4° E20
E21 -150.5° -16.9° -54.0° 130.5° 102.4° -73.9° 44.0° -137.9° 21.7° 106.8° 138.0° -100.1° 109.4° 31.3° 144.3° -64.1° -138.5° 53.8° -87.7° -114.4° E21
E22 101.9° -95.7° -78.3° 80.6° 23.3° -147.6° -55.8° 134.2° 67.2° 158.1° -72.8° -116.9° -54.9° -72.4° 67.7° -67.3° 119.7° 81.7° -133.2° 75.5° -79.3° E22
H23 -60.9° 101.9° 114.9° -84.0° -138.8° 46.0° 139.7° -28.8° 130.7° -27.0° -90.0° 58.2° 111.2° 124.6° -96.3° 114.4° -44.4° -111.8° 49.1° -99.5° 118.0° -162.0° H23
H24 -43.9° 105.3° 158.8° -42.2° -100.8° 61.8° 147.4° -43.7° 128.3° -87.3° -57.2° 10.0° 59.0° 139.0° -96.9° 58.0° -32.9° 156.5° -32.4° -137.8° 107.8° -111.3° -60.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2xhda_ : (VAL6) (LYS258) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3bfub_ : (LYS4) (LYS253) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d1mm6a_ : (LYS4) (GLY259) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d3tdja_ : (LYS4) (TYR256) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d2xx9a_ : (LYS4) (GLY259) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d3bfuc_ : (LYS4) (LYS253) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d1lbca_ : (LYS4) (TYR256) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d2i3va_ : (LYS4) (TYR256) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d3o6ha_ : (LYS4) (LYS258) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d3dlna_ : (ARG4) (LYS258) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2xxhc_ : (LYS4) (LYS258) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d4f2oa_ : (ARG4) (LYS253) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ftja_ : (LYS4) (GLY259) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d4iy5a_ : (LYS4) (GLY259) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d3tdjb_ : (VAL6) (TYR256) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d3o29a_ : (LYS4) (LYS258) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d4o3aa_ : (LYS4) (LYS258) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d3o2aa_ : (LYS4) (LYS253) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d1p1oa_ : (LYS4) (LYS253) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d2xx7a_ : (VAL6) (GLY259) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94