Protein Concepts Dictionary

Tableau information

Concept source:  d4d9cc_  amino acid (a.a.) range (LEU21)(HIS325)

nSSEs in this Concept: 24

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHEHHEHEHEHEHEHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU21)   (PRO25) E1
	   (PRO25)   (LEU31) H2
	   (ARG33)   (ARG39) E3
	   (LYS51)   (GLU56) H4
	   (PHE57)   (GLY66) H5
	   (ASP68)   (GLY74) E6
	   (ASN79)   (LEU91) H7
	   (HIS94)  (ILE103) E8
	  (ALA107)  (THR112) H9
	  (GLY114)  (ASN123) H10
	  (GLN125)  (ASP130) E11
	  (PRO135)  (GLY150) H12
	  (ARG152)  (PRO157) E13
	  (SER162)  (CYS180) H14
	  (SER187)  (ALA192) E15
	  (ALA196)  (PRO211) H16
	  (VAL213)  (THR219) E17
	  (SER223)  (ALA243) H18
	  (ASP249)  (ASP255) E19
	  (ASP255)  (GLY260) H20
	  (ASP266)  (GLY280) H21
	  (THR288)  (SER300) H22
	  (GLY308)  (HIS314) E23
	  (ALA320)  (HIS325) H24

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                                      
H2      -53.7°   H2                                                                                                                                                               
E3      143.4°  147.3°   E3                                                                                                                                                        
H4     -166.9° -127.1°   44.7°   H4                                                                                                                                                 
H5      159.6°  133.3°   19.0°  -31.9°   H5                                                                                                                                          
E6      -36.5°   20.5° -147.5°  146.9°  142.9°   E6                                                                                                                                   
H7      134.3° -168.9°  -33.6°  -43.0°  -43.0° -170.1°   H7                                                                                                                            
E8      -37.3°   23.8° -142.3°  148.1°  139.2°   -5.4° -167.3°   E8                                                                                                                     
H9      151.8° -135.6°   48.7°  -16.7°  -42.3°  155.7°   33.3°  159.3°   H9                                                                                                              
H10     148.1° -157.4°  -18.3°  -34.2°  -25.1° -165.6°   18.0° -160.6°   32.7°   H10                                                                                                      
E11     -63.6°   19.0°  129.0°  121.8°  117.7°  -27.2°  160.7°  -26.6°  135.5° -142.8°   E11                                                                                               
H12     132.8°  161.2°  -15.7°  -51.6°  -33.3°  152.5°  -23.8°  147.3°  -49.8°  -17.7°  142.3°   H12                                                                                        
E13     -37.0°  -24.1° -170.8°  137.6°  156.3°  -24.0°  155.6°  -29.3°  137.0°  169.5°  -42.0°  169.8°   E13                                                                                 
H14     -53.4°  -85.1°  127.6°  114.0°  136.8°  -80.1°   95.2°  -83.9°   98.5°  113.0° -103.3°  112.9°  -61.3°   H14                                                                          
E15     105.0°  104.4°  -50.9°  -87.6°  -56.1°  -96.9°  -81.8°  -91.6°  -97.7°  -69.1°  -86.2°   58.1° -120.9°  144.7°   E15                                                                   
H16     -87.8°  -85.5°  116.5°   79.4°  110.7°  -95.2°   87.1° -100.6°   69.2°   98.5°  102.5° -110.9°   71.3°  -43.2°  166.8°   H16                                                            
E17      87.2°   86.4°  -70.9° -105.8°  -75.2°  -77.1° -100.9°   71.7° -117.3°  -89.1°  -69.6°   77.1° -101.1°  135.6°  -20.1° -171.9°   E17                                                     
H18    -138.0° -135.1°   58.4°   30.2°   55.1° -151.9°   34.2° -157.1°   13.9°   40.6°  141.5°  -55.6° -128.9°  -84.7°  109.0°  -58.2°  129.0°   H18                                              
E19      49.1°   75.5°  -99.5° -142.9° -111.1°  -56.7°  115.5°  -52.1° -146.8° -114.2°  -68.7°   97.0°  -75.9°   95.3°  -56.2°  136.1°  -40.6°  149.0°   E19                                       
H20     108.0°  107.1°  -47.7°  -84.5°  -53.0° -100.1°  -78.8°  -94.8°  -94.5°  -65.9°  -88.8°   55.2° -124.1°  145.8°    3.3° -163.6°  -23.3°  105.7°  -59.1°   H20                                
H21      84.2°  126.1°  -86.6°   86.7°  -98.2°  118.3°  -55.3° -120.7°   70.1°   73.3° -143.9°  -72.0°  102.2°   41.0° -119.4°   58.0° -127.7°  -57.9°  103.1° -118.0°   H21                         
H22     -51.4°  -39.9°  163.5°  119.3°  148.5°   46.7° -135.0°   52.0° -114.9°  146.7°   58.8° -158.5°   22.9°  -49.4°  143.2°  -48.6°  123.6° -106.1°   96.9°  146.2°   88.9°   H22                  
E23     121.2°  129.9°  -26.7°   69.5°  -38.4° -122.2°   55.9° -116.9°   75.4°  -44.3° -111.3°   32.2° -146.1°  135.9°  -25.9°  142.5°  -45.3°   84.9°  -73.6°  -22.9°  -98.9° -168.9°   E23           
H24     -56.4°   62.1° -102.1°  136.7°  107.3°  -47.4°  127.7°  -42.1°  149.5°  119.8°  -50.8°  105.2°  -70.7° -108.8°   51.9° -141.1°   32.2°  160.4°  -21.1°   55.2° -124.0°  -93.5°   75.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4d96b_ :    (THR19)  (HIS325)   [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
 d4d9ec_ :    (LEU21)  (HIS325)   [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
 d4d9cc_ :    (LEU21)  (HIS325)   [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
 d4d96a_ :    (THR19)  (HIS325)   [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.79