Tableau information
Concept source: d1oqga_ amino acid (a.a.) range (LYS4)(LEU266)
nSSEs in this Concept: 24
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEEEHHHEHHHEHHEEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS4) (CYS9) E1
(GLU13) (VAL29) H2
(GLY34) (ALA43) E3
(TYR45) (ASN55) H4
(ASP58) (GLU63) E5
(GLU63) (LEU72) H6
(ASN76) (GLY86) E7
(THR93) (ALA99) E8
(LYS115) (THR120) E9
(ARG124) (LEU135) H10
(PRO140) (LEU146) H11
(LEU146) (PHE153) H12
(SER155) (PRO160) E13
(GLN172) (PRO175) H14
(ASN183) (PHE186) H15
(GLY187) (GLY198) H16
(ASP201) (VAL205) E17
(SER208) (LEU214) H18
(ASN216) (GLN222) H19
(GLN222) (LEU228) E20
(ASN230) (PRO234) E21
(TYR238) (HIS242) H22
(ALA244) (ARG254) E23
(GLU260) (LEU266) H24
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 164.0° H2
E3 -21.2° -170.0° E3
H4 147.7° -48.4° 128.2° H4
E5 -45.2° 124.0° -64.8° -144.5° E5
H6 106.4° -89.6° 87.0° -41.4° 129.6° H6
E7 -84.2° 80.0° -104.3° 127.5° -54.6° -167.9° E7
E8 -7.4° 158.4° -24.0° -152.1° -47.3° -110.8° 80.4° E8
E9 -162.0° -26.9° 144.2° 32.6° 150.8° -68.7° 102.9° 157.1° E9
H10 48.1° -136.1° 53.2° -113.7° -42.3° 87.4° -95.9° -55.2° -144.7° H10
H11 148.3° -40.3° 130.4° -35.0° -163.8° -62.7° 111.1° 144.4° -14.0° -147.7° H11
H12 -49.7° 114.3° -68.9° 162.7° 39.0° -155.9° 35.6° 45.1° -132.5° 77.8° -134.5° H12
E13 -157.8° -31.1° 139.9° 32.5° 155.1° -66.4° 105.8° 153.4° -4.4° -145.9° -9.7° 133.8° E13
H14 -110.3° 67.2° -103.5° -79.9° 133.1° -92.2° 89.4° 103.8° -54.0° -156.7° 45.4° -94.1° -51.4° H14
H15 137.0° -33.7° 156.2° -68.0° 91.9° -105.5° 62.4° 137.3° -59.3° 106.3° -73.3° 96.9° -63.7° 96.3° H15
H16 -25.8° 138.3° -44.6° -172.7° -38.6° 131.6° -59.7° 20.7° 150.8° 64.2° 145.3° -24.3° 149.9° 99.9° 119.2° H16
E17 169.1° -24.9° 153.5° 25.5° 132.2° 66.5° -102.1° -176.5° -25.1° 121.7° -37.1° 137.6° -28.5° -78.9° -43.7° -161.8° E17
H18 -84.9° 85.2° -89.0° 114.5° -97.1° -124.6° 60.9° -77.5° 84.3° -130.9° 79.5° -58.0° 83.0° 36.0° 99.7° -66.8° 105.9° H18
H19 50.1° -143.5° 40.9° -100.0° -68.4° 63.4° -122.9° 57.0° -131.5° -29.7° 125.8° 96.0° -129.7° 133.2° -127.4° 74.7° -119.4° 129.8° H19
E20 95.1° -96.3° 88.4° -62.5° 87.9° 48.5° -126.2° 102.4° -93.9° 51.3° -97.2° 126.8° -94.6° -138.7° -85.2° 115.3° -74.0° 172.8° -47.6° E20
E21 -119.1° 48.1° -127.2° 89.0° 108.4° 121.8° 54.4° -112.0° 56.6° 150.4° 59.4° -76.2° 57.5° 40.5° 63.3° -95.6° 71.6° -38.3° -168.1° 144.3° E21
H22 72.1° -123.5° 56.7° -76.1° 93.4° -37.8° -147.9° 78.1° -106.2° 52.1° -100.2° 120.7° -104.2° -118.7° -123.7° 97.8° -98.6° 134.9° 25.6° 39.1° -157.4° H22
E23 125.6° -65.0° 106.0° 41.4° 170.8° 47.3° 130.6° 123.9° -38.2° 133.5° 24.9° -138.9° -33.9° -46.1° -97.2° 134.3° -56.4° -81.6° 105.4° 92.7° -76.2° 81.4° E23
H24 -85.5° 78.7° -102.3° 126.5° -67.8° 162.5° -18.9° 79.8° 96.0° -110.1° 100.5° -36.8° 97.7° 71.4° -71.5° 59.7° -103.4° 42.1° -132.5° -145.0° 41.1° 157.4° 115.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3fgsa_ : (LYS4) (LEU266) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1oqha_ : (LYS4) (HIS273) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1bp5a_ : (LYS4) (HIS273) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1fqfa_ : (LYS4) (HIS273) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1jqfa_ : (LYS4) (HIS273) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1d3ka_ : (LYS4) (HIS273) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d2o7ua_ : (LYS4) (LEU266) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1oqga_ : (LYS4) (LEU266) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1lcfa1 : (VAL6) (LYS277) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1fqea_ : (LYS4) (LEU266) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1ryoa_ : (LYS4) (LEU266) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94