Protein Concepts Dictionary

Tableau information

Concept source:  d1egna_  amino acid (a.a.) range (SER2)(GLY269)

nSSEs in this Concept: 24

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEHEEEEEEEEHEEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER2)    (LEU6) E1
	    (LEU6)   (SER21) E2
	   (GLY23)   (ILE34) E3
	   (ARG39)   (ALA43) E4
	   (ASN64)   (ASN70) H5
	   (ASN70)   (ALA76) E6
	   (ALA77)   (GLY83) H7
	   (GLY83)   (GLY88) E8
	   (ASN89)   (PHE95) E9
	   (PHE95)   (SER99) E10
	  (GLN101)  (GLY105) E11
	  (ARG107)  (ALA112) E12
	  (GLN118)  (LEU123) E13
	  (GLY124)  (ASP130) E14
	  (TYR145)  (SER148) E15
	  (PRO159)  (GLY164) H16
	  (GLY191)  (ASN197) E17
	  (ASN200)  (GLY205) E18
	  (GLY205)  (SER211) E19
	  (SER211)  (ILE215) E20
	  (ILE221)  (THR231) E21
	  (GLU236)  (GLY240) E22
	  (THR255)  (ASP259) E23
	  (ASN264)  (GLY269) H24

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                                      
E2     -114.4°   E2                                                                                                                                                               
E3       79.1°  159.8°   E3                                                                                                                                                        
E4       96.8° -142.1°   41.7°   E4                                                                                                                                                 
H5       39.2°  -99.1°  100.6°   91.6°   H5                                                                                                                                          
E6      -51.3°   63.1°  127.3°  143.9°  -53.5°   E6                                                                                                                                   
H7       93.1°  -89.2°   74.6°  111.0°  130.5°  -89.7°   H7                                                                                                                            
E8      -95.4°   41.2° -157.2° -118.7°  -63.9°  -58.4° -128.0°   E8                                                                                                                     
E9       81.8° -130.7°   32.7°   72.3°  117.2°  112.6°   42.1°  169.0°   E9                                                                                                              
E10      56.5°  153.1°  -46.8°  -40.8°   57.1°  104.0° -115.3°  112.0°  -75.4°   E10                                                                                                      
E11    -126.1°  -12.2°  149.2°  133.8° -110.2°  -74.7°  -85.5°   49.2° -124.7°  159.2°   E11                                                                                               
E12     -99.7°  -65.4°  129.3°   89.4°  -60.7°  -81.4° -154.5°  -29.3°  161.7°   90.1°  -69.1°   E12                                                                                        
E13     131.9°   31.7° -128.1° -130.5° -130.1°   84.6°  -64.9°   71.6° -102.3° -171.4°   22.5°   90.3°   E13                                                                                 
E14      19.9°  119.7°  -68.0°   97.0°   59.2°   59.4°  -74.3°  112.2°  -63.3°   61.6° -129.2°  119.7° -125.1°   E14                                                                          
E15    -134.9°  -86.3°   94.3°   55.9° -100.8° -131.7°  128.5°  -73.8°  115.7°  -86.6°  -79.7°  -51.1°  -87.0°  147.8°   E15                                                                   
H16      39.2°   75.5°  115.0°  134.4°   48.7°  -12.5°  -87.8°  -68.5°  103.5°   93.6°  -86.9°  -88.3°   95.0°   47.1° -139.4°   H16                                                            
E17     -47.0°   81.3°  -99.9° -136.5°  -74.0°   34.8°   59.0°   91.9°  -78.3° -101.2°   89.3° -116.2°   86.3°  -40.3° -165.5°  -29.2°   E17                                                     
E18     168.0°  -74.5°   94.6°   72.1° -134.2° -137.3°  -95.1°  -86.4°  -98.6°  111.9°  -63.4°   76.2°  -59.9° -161.4°   34.7° -149.8°  144.9°   E18                                              
E19     -99.0°  -20.8° -177.8°  140.1°  -78.4°  -50.5° -104.4°   23.6° -146.2°  133.0°  -31.9°   51.9°   52.4° -109.9°   87.8°  -62.8°  -78.0°  -87.4°   E19                                       
E20     -45.7°   70.8° -116.6°  142.4°   58.5°   12.8°  -79.3°   71.1°  -99.8°  101.6°  -81.5°   94.0°   87.0°  -49.5°  144.5°    9.8°  -22.2° -144.9°   61.2°   E20                                
E21    -144.2°  -91.6°   83.8°   51.5° -116.0° -146.7°  112.5°  -88.3°  100.2°  -89.1°  -82.3°  -67.9°  -83.1°  148.5°  -17.1° -156.0°  168.7°   23.9°  -98.4° -159.1°   E21                         
E22      85.1°  126.4°  -36.4°  -75.0°  121.3°  112.8°   38.2°  166.1°   -4.6°  -79.9°  120.1° -164.1°   97.7°  -66.1°  115.5°  104.5°   78.2°  -96.0°  142.6° -100.1°   99.4°   E22                  
E23     -54.5°   73.0° -106.9° -144.9°   77.9°   32.4°  -58.0°   86.8°  -82.9° -109.5°   80.8°  113.0°   78.1°  -48.8°  158.6°   30.2°    8.6° -137.5°   71.0°  -21.3°  161.2°  -82.1°   E23           
H24     110.5°  -62.2°   99.7° -127.4°  137.3°   84.5°  -28.2°  102.9°  -68.5° -143.3°  -57.4° -126.5°  -36.9°  -95.4° -114.6°   88.6°   65.7°  -80.4°  -79.9°  -78.8° -103.2°   64.2°   60.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1egna_ :     (SER2)  (GLY269)   [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Cel7A [TaxId: 51453]
 d4gwaa_ :    (GLN24)  (GLY295)   [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |automated matches |Limnoria quadripunctata [TaxId: 161573]
 d4c4ca_ :     (SER2)  (GLY269)   [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Cel7A [TaxId: 51453]
 d1q2ba_ :     (SER2)  (GLY269)   [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Cel7A [TaxId: 51453]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29