Protein Concepts Dictionary

Tableau information

Concept source:  d4iymh_  amino acid (a.a.) range (GLN52)(GLY342)

nSSEs in this Concept: 23

String of secondary struct.elems. (SSEs) defining this concept: HHHHHEEEHEHEHEHEEHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLN52)   (THR58) H1
	   (PRO60)   (ASN77) H2
	   (ASN79)   (LEU85) H3
	   (THR92)  (ILE111) H4
	  (GLY112)  (LYS118) H5
	  (SER119)  (GLU123) E6
	  (GLY128)  (PRO137) E7
	  (GLY139)  (THR145) E8
	  (PHE149)  (GLY165) H9
	  (PHE168)  (SER173) E10
	  (PRO177)  (GLY191) H11
	  (ILE196)  (GLY202) E12
	  (LYS204)  (HIS213) H13
	  (ALA217)  (VAL222) E14
	  (THR225)  (GLY239) H15
	  (ALA242)  (GLY246) E16
	  (LYS249)  (MSE255) E17
	  (LEU260)  (GLY273) H18
	  (SER283)  (VAL288) E19
	  (GLU290)  (SER306) H20
	  (SER306)  (PRO311) E21
	  (ASP318)  (THR324) E22
	  (THR324)  (GLY342) H23

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                               
H2     -101.8°   H2                                                                                                                                                        
H3     -137.4°  -72.6°   H3                                                                                                                                                 
H4      -67.0° -165.1°  122.2°   H4                                                                                                                                          
H5      -89.7°  135.4°  -70.2°  -56.8°   H5                                                                                                                                   
E6      -54.6° -155.7° -119.7°   18.7°  -49.5°   E6                                                                                                                            
E7      127.6°   28.0°   62.8° -155.9°  132.9° -174.5°   E7                                                                                                                     
E8       99.9°  -23.0°  -58.6°  161.8°  112.9°  143.1°  -42.3°   E8                                                                                                              
H9      -73.4°  161.0°  123.6°  -10.5°  -63.6°   29.1° -145.4°  172.1°   H9                                                                                                       
E10     113.7°  -29.3°  -45.2°  163.5°  106.9°  148.3°  -37.1°  -14.6°  168.8°   E10                                                                                               
H11      58.4°  127.7°  155.7°  -38.5°  -95.1°  -48.2° -127.3°  145.2°  -34.1°  157.0°   H11                                                                                        
E12    -135.4°  -51.6°   21.3°  143.3°   90.6°  140.0°  -43.3°  -40.6°  143.3°  -26.1° -165.3°   E12                                                                                 
H13     -70.4° -172.1° -113.4°    9.6°  -47.3°  -16.8°  158.8° -156.0°   17.7° -154.1°   48.0°  134.6°   H13                                                                          
E14      81.7°  -28.6°  -74.7°  147.1°  115.7°  129.7°  -55.2°  -18.4°  155.1°  -32.9°  129.6°  -58.5° -145.9°   E14                                                                   
H15     -94.4°  158.1°  105.0°  -27.7°  -58.4°  -44.3°  131.1°  163.4°  -21.3°  149.1°  -50.9°  123.0°  -27.7° -173.1°   H15                                                            
E16      89.4°  -26.7°  -66.5°  153.0°  112.7°  134.6°  -50.6°  -10.5°  162.2°  -24.7°  137.7°  -50.1° -149.6°    8.4° -170.3°   E16                                                     
E17      33.9°  -77.1° -107.1°   95.9°   91.1°   79.1° -105.1°  -68.2°  104.3°  -80.9°   92.0° -101.6°   95.9°  -51.2° -123.2°  -57.9°   E17                                              
H18     147.9°   96.9°   73.2°  -89.3°  -95.1° -106.6°   69.0° -107.3°  -80.4°  -95.2°  -89.6°  -76.3°   89.9° -123.5°   62.3° -117.4° -173.4°   H18                                       
E19     -47.2°  -90.3°  -90.2°   88.6°   66.3°   69.9° -115.5°   73.3°   98.9°   81.5°  101.6°   93.1°  -84.7°  -61.7° -111.5°   65.0°  -26.1° -158.9°   E19                                
H20     117.6°   66.5°  -99.2°  109.1° -143.1°  126.1°  -48.5°  -87.9°   98.9°  -85.5°   80.9°  -86.4°  116.1°  -93.8°   93.0°  -93.2°  125.6°  -48.5°  150.5°   H20                         
E21     126.0°  105.4°  -95.3°  -76.0° -101.7°   94.6°  -80.1° -122.1°   65.8° -112.8°   68.1°  -97.4°   79.6° -134.0°   52.8° -130.7°  157.0°  -22.1°  164.2°  -42.6°   E21                  
E22    -146.5°  110.9°   52.4°  -81.8°  -62.1°  -92.2°   85.9° -107.3°   77.7°   92.7° -103.9°   66.9°  -76.9° -125.4°   56.5° -117.0° -149.6°   35.3° -123.7°  -83.1°  -51.7°   E22           
H23     -77.3°  -77.4°  -60.2°  108.1°   63.2°   90.7°  -94.8°  -55.2°  118.2°   57.7°  131.1°   63.4° -100.9°  -52.7°  121.0°  -51.2°  -49.1°  132.7°  -30.4° -142.8° -153.8°  102.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4iyme_ :    (GLN52)  (GLY342)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4iymo_ :    (GLN52)  (GLY342)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4e4gh_ :    (GLN52)  (GLY342)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4iymh_ :    (GLN52)  (GLY342)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4iymc_ :    (SER37)  (GLY342)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4e4gf_ :    (GLN52)  (ILE339)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4e4gg_ :    (GLN52)  (GLY342)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82