Protein Concepts Dictionary

Tableau information

Concept source:  d3smab_  amino acid (a.a.) range (THR23)(ALA276)

nSSEs in this Concept: 23

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHHHEEHHHEHEEEEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR23)   (GLY35) H1
	   (GLY40)   (VAL44) E2
	   (SER47)   (GLY52) H3
	   (ALA58)   (VAL69) H4
	   (GLU72)   (PRO78) E5
	   (PRO96)  (TRP100) H6
	  (TRP100)  (GLN106) H7
	  (GLY121)  (ALA130) H8
	  (GLY132)  (SER136) E9
	  (ASN141)  (GLY147) E10
	  (ALA150)  (VAL154) H11
	  (GLU161)  (SER167) H12
	  (PRO168)  (ASP176) H13
	  (ASP176)  (LEU182) E14
	  (GLY185)  (THR199) H15
	  (PRO202)  (ARG208) E16
	  (ARG209)  (PRO214) E17
	  (ASP217)  (GLU223) E18
	  (ASP226)  (GLU232) E19
	  (ASP233)  (THR245) H20
	  (PRO246)  (THR252) E21
	  (ALA257)  (GLY262) E22
	  (ARG264)  (ALA276) H23

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                               
E2      114.7°   E2                                                                                                                                                        
H3       98.9°   97.0°   H3                                                                                                                                                 
H4      -42.1°  156.8°   88.6°   H4                                                                                                                                          
E5       97.7°  -21.2°  113.3°  138.3°   E5                                                                                                                                   
H6      -68.0° -138.1°  124.5°  -44.7° -121.6°   H6                                                                                                                            
H7      -91.9°  151.8°   87.3°  -50.5° -155.4°  -42.6°   H7                                                                                                                     
H8      -99.2° -130.8°  112.3°  -65.7° -127.6°   32.6°   27.8°   H8                                                                                                              
E9       59.1°  -63.8°  132.4°   95.9°  -42.9°  -88.2° -130.7° -112.6°   E9                                                                                                       
E10     -97.2°  141.3°  -54.9°  -58.6°  162.4°   73.0°   32.4°   58.5°  154.5°   E10                                                                                               
H11      78.2°  -52.7°  141.6°  111.0°  -32.2°  -90.4° -130.8° -105.9°   20.1° -163.1°   H11                                                                                        
H12     -73.0°  171.1°  -85.6°  -31.2°  160.3°   39.0°  -19.5°   41.1°  120.2°  -36.1°  128.2°   H12                                                                                 
H13     -59.8° -145.4°  -54.4°   34.3° -147.2°  -74.5°   56.0°   82.2°  118.6°   40.5°  138.0°  -41.5°   H13                                                                          
E14     128.6°  -35.7°   63.4°  150.3°  -56.1°  162.5°  131.3°  132.1°  -96.3°  106.9°  -88.2°  143.0° -117.2°   E14                                                                   
H15     -45.5°  113.6° -139.8°  -53.2°   92.8°  -36.3°  -77.9°  -66.8°   53.1° -104.3°   60.9°  -68.2°  -87.0°  148.8°   H15                                                            
E16    -136.8°   71.7°  123.5° -123.2°   74.8°  -79.9°  -82.7°  -59.2°  -92.9° -100.3°  -73.7°  -99.8° -138.0°   83.0°  -91.7°   E16                                                     
E17    -132.7°  108.4°  -94.1°  -93.5°  118.2°   67.2°   43.4°  -34.7° -132.6°  -55.5° -116.2°  -62.9°  -94.1°   97.9°  -99.8°  -44.9°   E17                                              
E18      27.2°  -88.2°   97.4°   68.7°  -73.4°  -91.3°  119.0°  123.8°   43.1°  118.6°   62.9°   99.9°   78.2° -103.5°   60.1° -135.6°  158.5°   E18                                       
E19      92.7°  -76.0°   26.8°  101.5°  -88.6°  145.0°  113.6°  139.1° -107.2°   81.4° -114.9°  108.8°   70.5°  -49.0°  138.0°  128.8°  116.2°  -80.4°   E19                                
H20      67.7° -159.1°  -62.5°   31.4°  162.8°   62.7°  -39.6°   66.0°  125.9°  -29.5°  142.4°   26.2°   16.4° -125.4°   83.3° -121.9°  -79.0°   90.3°  -83.2°   H20                         
E21     149.0°  -51.5°   61.2°  146.3°  -72.5°  142.3°  109.3°  110.0° -115.2°   89.9° -102.4°  124.1°  113.5°  -23.0°  159.0°   70.3°   75.4° -126.1°  -58.5° -115.0°   E21                  
E22     -50.0°  137.3° -122.9°  -34.8°  117.0°  -18.0°  -54.5°  -50.3°   77.2°  -80.0°   84.8°  -43.8°  -68.7°  173.1°   24.4°  -94.8°  -85.0°   73.5°  135.0°   61.3°  160.3°   E22           
H23      62.2°   53.0°  111.7°  104.0°   35.8° -108.1° -149.2° -134.3°  -21.7°  155.2°  -33.2° -133.7° -115.0°   79.5°  -72.0°  104.3° -148.8°  -37.7°   85.8°  128.0° -101.3°   94.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3smaa_ :    (THR23)  (ALA276)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Streptomyces rubellomurinus [TaxId: 359131]
 d3smac_ :    (THR23)  (ALA276)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Streptomyces rubellomurinus [TaxId: 359131]
 d3smad_ :    (THR23)  (ALA276)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Streptomyces rubellomurinus [TaxId: 359131]
 d3smab_ :    (THR23)  (ALA276)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Streptomyces rubellomurinus [TaxId: 359131]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.140