Protein Concepts Dictionary

Tableau information

Concept source:  d2fpva_  amino acid (a.a.) range (VAL105)(GLY382)

nSSEs in this Concept: 23

String of secondary struct.elems. (SSEs) defining this concept: HEEEHHEHEHHEHEEHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL105)  (MET111) H1
	  (GLY114)  (GLY119) E2
	  (ARG133)  (GLU139) E3
	  (GLN141)  (ARG146) E4
	  (SER155)  (ALA163) H5
	  (ARG164)  (GLY175) H6
	  (LEU178)  (LYS184) E7
	  (ASP190)  (VAL201) H8
	  (TYR208)  (VAL213) E9
	  (LEU221)  (LYS227) H10
	  (LYS227)  (GLY243) H11
	  (ALA251)  (ALA257) E12
	  (THR261)  (GLU274) H13
	  (ASP278)  (THR283) E14
	  (VAL287)  (ALA291) E15
	  (GLY295)  (GLU300) H16
	  (GLY302)  (GLY306) E17
	  (ASP311)  (GLN325) H18
	  (PRO329)  (GLY334) E19
	  (SER338)  (GLY349) H20
	  (SER351)  (TYR356) E21
	  (TYR356)  (TRP362) H22
	  (PRO365)  (GLY382) H23

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                               
E2      147.3°   E2                                                                                                                                                        
E3       12.8°  135.9°   E3                                                                                                                                                 
E4     -164.6°   30.2°  161.9°   E4                                                                                                                                          
H5      -58.0°  153.6°  -67.6°  129.4°   H5                                                                                                                                   
H6       26.1° -136.1°   33.2° -138.8°   69.5°   H6                                                                                                                            
E7      129.4°  -19.1°  119.5°  -43.9° -172.6° -117.4°   E7                                                                                                                     
H8      -75.5°  135.1°  -83.8°  114.0°  -18.5°  -87.9°  154.3°   H8                                                                                                              
E9      105.3°  -42.1°   94.8°  -68.6°  161.9°   98.5°  -24.8°  166.1°   E9                                                                                                       
H10     -67.7°  115.6°  -77.0°   99.4°  -77.1°  -44.0°  105.8°  -89.1° -104.1°   H10                                                                                               
H11     -99.7°  112.5° -109.1°   88.5°  -41.8° -106.6°  130.9°  -25.7°  154.3°  -90.6°   H11                                                                                        
E12      79.7°  -69.1°   67.4°  -98.8°  129.4°   84.8°  -56.1°  136.7°  -33.2° -113.4°  153.1°   E12                                                                                 
H13    -103.5°  107.2° -116.1°   77.2°  -55.0°  -96.8°  119.6°  -47.7°  142.3°   65.6°  -30.1°  175.5°   H13                                                                          
E14      76.8°  -79.4°   64.3° -108.7°  110.0°   92.7°  -73.3°  112.0°  -55.6° -132.4°  126.8°  -26.5°  156.9°   E14                                                                   
E15      33.3° -115.8°   20.6° -144.6°   85.9°   47.2° -100.8° -100.0°   76.0°  -90.0° -125.7°   46.9° -136.6°  -45.9°   E15                                                            
H16    -140.1°   46.6° -144.0°   25.2° -125.3° -114.1°   50.6°  117.1°  -71.5°  -74.5°   92.9° -104.8°   70.8° -123.8° -138.9°   H16                                                     
E17     -28.2° -173.1°  -38.5°  156.4°  -29.8°   43.5°  157.6°  -47.6°  133.2°   69.3°  -71.5°  104.7°  -79.2°   93.6°   58.2° -140.0°   E17                                              
H18     -95.6°   97.1° -106.0°   73.5°  -83.7°  -73.3°   95.7°  -87.2°  106.4°   29.4°  -76.5°  130.4°  -46.6°  156.1°  119.2°   50.9°  -89.3°   H18                                       
E19      83.8°  -75.7°   71.7° -103.5°  109.5°  101.5°  -72.6°  108.4°  -58.3° -141.8°  119.9°  -33.2°  149.5°   -9.4°  -54.4°  121.8°   97.5°  163.5°   E19                                
H20    -101.3°   81.5°  108.2°  -64.7° -104.0°  -75.6°   76.3° -108.4°   85.2°   35.3°  -95.7°  110.9°  -65.6°  137.4°  114.2°  -39.5°  104.0°  -21.2°  142.9°   H20                         
E21     112.1°  -58.7° -101.3°   79.0°  111.8°  133.0°  -66.0°  100.7°  -65.9° -169.9°   99.3°  -57.4°  123.2°  -41.1°  -85.9°  102.8° -115.8°  152.2°  -31.9°  140.2°   E21                  
H22      74.6° -102.5°  -67.9°  119.6°   73.1°  100.3° -107.0°   69.9°  -96.7° -140.5°   84.3°  -69.6° -114.1°   43.2°  -62.8°  144.8°  -72.0° -156.6°   38.5° -175.7°  -43.8°   H22           
H23     -44.2°  128.7°   52.5° -121.5°  -72.6°  -19.4°  112.9°  -89.5°  100.7°  -24.7° -101.2°   96.9°  -83.6°  110.0°   65.6°  -96.3°   53.7°  -54.1°  119.1°  -57.0°  151.1°  118.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3u2oa_ :   (ALA104)  (GLY382)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
 d2fpva_ :   (VAL105)  (GLY382)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
 d3kvma_ :   (VAL105)  (GLY382)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
 d3kvla_ :   (VAL105)  (GLY382)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
 d2wv8a_ :   (ALA104)  (GLY382)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2prla_ :   (ALA104)  (GLY382)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1