Protein Concepts Dictionary

Tableau information

Concept source:  d1ydba_  amino acid (a.a.) range (GLY8)(SER259)

nSSEs in this Concept: 23

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEEHEEEHEHEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLY8)   (PHE20) H1
	   (GLU26)   (PRO30) E2
	   (ALA38)   (PRO42) E3
	   (PRO46)   (TYR51) E4
	   (GLN53)   (GLY63) E5
	   (ALA65)   (ASP71) E6
	   (ALA77)   (GLY81) E7
	   (GLY86)   (GLN92) E8
	   (GLN92)   (GLY98) E9
	  (LEU100)  (GLU106) H10
	  (GLU106)  (ASP110) E11
	  (LYS111)  (ALA115) E12
	  (ALA115)  (LYS127) E13
	  (PHE131)  (GLN137) H14
	  (GLY140)  (VAL150) E15
	  (LYS154)  (LYS168) H16
	  (LYS172)  (ASN178) E17
	  (TYR191)  (PRO195) E18
	  (THR208)  (LEU212) E19
	  (LYS213)  (SER219) E20
	  (SER219)  (LEU229) H21
	  (PRO247)  (ASN253) E22
	  (ASN253)  (SER259) E23

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                               
E2      150.9°   E2                                                                                                                                                        
E3       61.6°  -89.6°   E3                                                                                                                                                 
E4      114.6°  -60.4°   95.2°   E4                                                                                                                                          
E5      111.1°  -97.0°  170.6°  -82.4°   E5                                                                                                                                   
E6       55.6°   95.9°   20.0°   81.9°  151.4°   E6                                                                                                                            
E7      -61.3°  122.1°   81.2°  175.5° -100.6°  -93.9°   E7                                                                                                                     
E8      146.0°  -51.3° -130.4°  -42.2°  -52.0°  122.6°  142.3°   E8                                                                                                              
E9     -128.1°  -77.8° -145.0° -106.1°  -43.8°  164.9°   78.3°   64.0°   E9                                                                                                       
H10      11.6°  144.4°   58.9°  103.1°  112.6°  -48.9°  -72.6°  137.5°  137.5°   H10                                                                                               
E11     -90.6°  -91.5°  -85.6° -151.8° -100.8°  104.3°   31.2° -119.7°  -62.6° -101.3°   E11                                                                                        
E12     122.7°   43.8°   84.8°  -19.6°  -95.4°   76.7°  160.4°  -46.4° -106.5°  111.4°  134.2°   E12                                                                                 
E13      25.9°  129.1°   48.5°   91.7°  122.3°  -34.9°  -83.9°  131.1°  153.1°   15.7°  109.2°   97.1°   E13                                                                          
H14     -72.5°  124.3°  106.7° -157.3°  -75.0°  117.4°   25.6° -120.0°  -58.3°   83.7°   40.0° -164.6°   98.2°   H14                                                                   
E15    -160.7°   36.1° -115.5°  -84.4°  -73.4°  128.4°   99.6°  -51.8°  -42.4° -170.7°  -70.1°   74.2°  163.3°  -91.4°   E15                                                            
H16      96.4°  -98.9°  128.9°   50.1°  -43.6°  109.1° -130.6°   50.2°  -85.7°   90.2° -143.7°  -69.0°   90.8° -109.1°  -98.9°   H16                                                     
E17     -78.4°   76.3°  -25.4° -106.3°  163.6°  -45.0°   71.6°  126.6°  119.9°  -79.4°   64.9°   90.0°  -72.1°   96.2°   93.3°  151.4°   E17                                              
E18     -52.3° -148.0°  109.6°   91.7°   61.5°  -95.2°  -86.9°   97.8°   97.3°  -51.4°  114.6° -110.8°  -61.4°  -75.5°  134.9°   49.1° -130.4°   E18                                       
E19    -145.0°   28.3°  -91.6°  -88.3°  -97.4°  105.9°   94.6°  -68.3°  -62.3° -148.9°  -63.5°   72.1°  140.0°  -96.9°  -24.0° -118.5°   69.6°  158.7°   E19                                
E20     149.5°  -37.2°  113.9°  -35.3°  -69.0°  108.9°  149.0°  -17.1°  -74.4°  138.3° -119.7°   32.4°  126.7° -132.6°  -49.8°  -61.8°  110.1° -110.8°   59.7°   E20                         
H21      71.7° -123.4°  117.0°   67.8°  -53.8°   98.0° -111.3°   75.4°  -96.9°   66.7° -136.2°   87.3°   70.9°  -96.2° -121.9°   25.2° -142.2°  -24.9° -143.3°   86.6°   H21                  
E22     -32.6° -136.1°   59.4°  143.9°  118.1°  -66.1°  -31.6°  170.1° -108.9°   42.9°  -58.4°  142.8°   52.5°   51.5° -128.3°  124.5°  -62.5°   75.7° -115.5°  172.6°   99.4°   E22           
E23     109.7°  -42.2°  -48.2°  -78.1° -139.1°   59.4°  101.3°  -91.0° -109.0°  106.7°  -81.6°   59.1°   94.1°  121.1°  -69.1°  128.1°   35.6°  153.5°  -46.8°   74.5°  141.8°  -98.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3dvba_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d3mnka_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d2nxra_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1ydaa_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1heca_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1a42a_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1cnka_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1fqla_ :     (GLY8)  (VAL242)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1cnga_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d4m2va_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1ydba_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1g3za_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d3rgea_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d3dbua_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1zsaa_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1am6a_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1ugba_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1h4na_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1okla_ :     (GLY8)  (SER258)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1cnha_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.74