Protein Concepts Dictionary

Tableau information

Concept source:  d1mp4a_  amino acid (a.a.) range (ARG4)(GLY274)

nSSEs in this Concept: 23

String of secondary struct.elems. (SSEs) defining this concept: EHHEHEHHEEHEEEEEHHEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG4)   (ALA10) E1
	   (TYR18)   (VAL24) H2
	   (ILE37)   (GLY48) H3
	   (ASP51)   (THR57) E4
	   (THR57)   (LEU67) H5
	   (GLY75)   (PRO84) E6
	   (GLN91)   (GLY96) H7
	   (GLY96)  (GLY101) H8
	  (ASP104)  (LEU109) E9
	  (ASP111)  (GLY116) E10
	  (ASP118)  (LYS129) H11
	  (ALA133)  (HIS139) E12
	  (GLY147)  (ASP152) E13
	  (VAL158)  (GLU162) E14
	  (ASN170)  (LEU176) E15
	  (LEU176)  (ASP180) E16
	  (ASP180)  (LEU190) H17
	  (ILE200)  (GLY211) H18
	  (ARG212)  (MET217) E19
	  (GLY221)  (THR227) E20
	  (THR229)  (GLY248) H21
	  (PRO254)  (ASN262) H22
	  (ALA266)  (GLY274) H23

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                               
H2     -116.8°   H2                                                                                                                                                        
H3      169.8°  -71.9°   H3                                                                                                                                                 
E4      -16.6° -111.6°  158.1°   E4                                                                                                                                          
H5      123.0°   71.9°  -63.4°  138.5°   H5                                                                                                                                   
E6      -44.1° -105.8°  130.6°  -27.8° -165.1°   E6                                                                                                                            
H7      121.2°   11.3°  -68.4°  119.1°  -60.6°  116.5°   H7                                                                                                                     
H8      168.0°   69.0°  -16.4° -174.4°   47.1°  146.8°  -62.5°   H8                                                                                                              
E9      -22.4°  125.7°  155.9°  -38.7°  103.9°  -65.0°  125.2°  145.6°   E9                                                                                                       
E10    -132.7°  102.8°   44.3°  144.4°  -46.3°  145.4°  -93.8°  -36.9°  111.8°   E10                                                                                               
H11     114.9°  -58.7°  -64.1°   98.5° -115.8°   72.9°  -67.6°  -77.1°  137.2°  107.1°   H11                                                                                        
E12     -49.5°  150.4°  125.5°  -62.3°   93.8°  -81.3°  143.7°  120.0°  -31.3°   83.3°  147.6°   E12                                                                                 
E13    -125.4°  116.3°   44.9°  123.7°  -84.9°  108.7° -113.3°  -52.9° -117.2°  -39.6°   83.0°  -87.1°   E13                                                                          
E14      36.5°  -81.5° -153.2°  -40.0°  105.1°  -60.2°   84.8°  144.1°   46.3°  144.3° -105.3°   77.4°  161.9°   E14                                                                   
E15    -108.9°   16.6°  -80.9° -108.5°  -62.7°  111.1°   12.8°   73.8° -112.5° -101.9°  -75.1°  134.0°  125.7°  -72.4°   E15                                                            
E16     138.0°  -51.1°  -42.5°  121.8°  -93.3°   96.4°  -56.2°  -54.0°  160.4°  -86.8°  -23.5° -158.2°   73.1° -120.4°  -67.1°   E16                                                     
H17      36.4° -102.4°  139.7°   19.8° -154.5°   10.6° -112.3° -155.2°   58.5°  153.2°   78.8°  -79.2°  118.7°  -49.6° -104.9°  102.2°   H17                                              
H18    -143.9°   95.0°   25.9°  136.7°  -81.1°  113.7°  -93.3°  -38.5° -138.8°  -44.1°   66.4° -108.5°  -21.6° -171.4°  106.1°   52.5°  124.3°   H18                                       
E19     -63.6°  123.2°  117.0°  -80.0°   66.2° -105.2°  114.4°  104.4°  -41.3°   73.7° -177.8°  -30.3°  -96.6°   74.5°  106.8°  158.2°  -99.6° -113.8°   E19                                
E20      38.0°  -83.2° -145.8°  -28.4°  130.5°  -35.8°   91.1°  151.5°   58.2°  169.8°  -83.1°  -87.4° -144.4°   27.5°   81.5° -103.4°  -26.0° -144.5°  -96.1°   E20                         
H21    -130.9°   77.1°   54.1° -147.3°  -11.9° -174.9°  -66.2°   38.0° -109.9°   34.9° -112.1°   94.1°   73.1° -116.8°  -70.6°  -88.7° -165.7°   69.7°   69.7° -142.4°   H21                  
H22     176.0°  -67.2°    7.5°  164.4°  -56.9°  136.6°  -62.6°  -10.3°  155.0°   43.8°  -67.2°  126.8°   50.8° -147.2°  -74.8°  -44.5° -145.0°   32.9°  114.2° -145.7°   48.3°   H22           
H23     -11.0°  108.4° -178.1°  -23.7°  114.8°  -51.2°  111.5°  161.9°  -22.7° -134.1°  117.7°  -53.5° -135.1°   26.9°   98.9°  139.1°   42.1° -154.7°  -61.2°   35.8° -124.1° -171.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1fxob_ :     (MET1)  (ALA276)   [view usage] : c.68.1.6 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |glucose-1-phosphate thymidylyltransferase |RmlA (RfbA) |Pseudomonas aeruginosa [TaxId: 287]
 d1h5ra_ :     (ARG4)  (ILE277)   [view usage] : c.68.1.6 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |glucose-1-phosphate thymidylyltransferase |RmlA (RfbA) |Escherichia coli [TaxId: 562]
 d1h5sa_ :     (ARG4)  (ILE277)   [view usage] : c.68.1.6 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |glucose-1-phosphate thymidylyltransferase |RmlA (RfbA) |Escherichia coli [TaxId: 562]
 d4asjb_ :     (ARG3)  (ALA273)   [view usage] : c.68.1.6 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |glucose-1-phosphate thymidylyltransferase |RmlA (RfbA) |Pseudomonas aeruginosa [TaxId: 287]
 d1mp5a_ :     (ARG4)  (GLY274)   [view usage] : c.68.1.6 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |glucose-1-phosphate thymidylyltransferase |RmlA (RfbA) |Salmonella enterica [TaxId: 28901]
 d1mp4a_ :     (ARG4)  (GLY274)   [view usage] : c.68.1.6 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |glucose-1-phosphate thymidylyltransferase |RmlA (RfbA) |Salmonella enterica [TaxId: 28901]
 d1iima_ :     (ARG4)  (LEU272)   [view usage] : c.68.1.6 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |glucose-1-phosphate thymidylyltransferase |RmlA (RfbA) |Salmonella enterica [TaxId: 28901]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.68