Protein Concepts Dictionary

Tableau information

Concept source:  d3m6si_  amino acid (a.a.) range (SER74)(THR316)

nSSEs in this Concept: 23

String of secondary struct.elems. (SSEs) defining this concept: EEHHEEHHEEEEHEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER74)   (TYR78) E1
	   (TYR78)   (THR82) E2
	   (THR82)   (GLY88) H3
	   (TYR98)  (SER106) H4
	  (SER106)  (SER109) E5
	  (SER109)  (ARG113) E6
	  (PRO118)  (SER122) H7
	  (ASP127)  (THR133) H8
	  (LYS142)  (ASN147) E9
	  (ASN147)  (LYS153) E10
	  (ASN156)  (ILE166) E11
	  (LYS171)  (PRO182) E12
	  (THR184)  (GLN193) H13
	  (ASP196)  (GLY202) E14
	  (LYS205)  (ALA215) E15
	  (GLU224)  (LEU233) E16
	  (GLY237)  (THR245) E17
	  (ASN247)  (ALA261) E18
	  (ALA261)  (ILE267) E19
	  (THR278)  (PRO282) E20
	  (GLY284)  (THR288) E21
	  (PRO291)  (ILE295) E22
	  (THR310)  (THR316) E23

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                               
E2       72.8°   E2                                                                                                                                                        
H3     -126.1°   92.5°   H3                                                                                                                                                 
H4     -107.9°  124.3°  122.2°   H4                                                                                                                                          
E5     -124.3°  135.8°  102.6°   19.9°   E5                                                                                                                                   
E6      124.4°  -59.7°   39.4° -121.6° -110.0°   E6                                                                                                                            
H7     -104.6°  -86.2°  -21.6°  140.6°  120.7°  -48.8°   H7                                                                                                                     
H8       26.4°  -51.8°  132.5° -104.9° -124.7° -110.7°  114.1°   H8                                                                                                              
E9      -92.3° -163.4° -102.4°   52.6°   48.0°  136.8°  105.0°  111.7°   E9                                                                                                       
E10    -109.2°  -71.3°   23.1°  142.7°  124.2°   31.3°  -18.6°  109.9°  121.8°   E10                                                                                               
E11     -85.0°  141.6° -125.7°   35.1°   41.5°  150.6°  130.4°  -96.1°  -25.4°  146.9°   E11                                                                                        
E12      78.8°  -35.0°  -63.3° -156.8° -155.1°  -45.8°  -52.0°   71.0° -150.6°  -40.2° -163.4°   E12                                                                                 
H13    -150.7°  130.1°  -76.2°   46.1°   27.4°   84.9°  -96.0° -149.5°  -61.9°   97.0°   65.7°  130.5°   H13                                                                          
E14     -91.8°  143.0°  122.9°   28.9°   34.3°  143.7°  130.7° -101.1°   26.8°  145.3°    7.2° -170.5°   58.9°   E14                                                                   
E15      78.2°   14.5°  -78.6° -136.4° -143.3°  -49.2°  -71.7°   61.6°  168.5°  -56.9°  155.6°  -21.3° -128.9°  157.5°   E15                                                            
E16    -101.7°  161.2°  104.9°   39.1°   33.5°  132.3°  112.7° -116.6°  -14.6°  126.9°  -21.2°  163.3°  -50.3°  -18.4° -175.4°   E16                                                     
E17      89.4°  -37.2°  -56.6° -150.1° -144.5°  -35.1°  -49.2°   79.7°  153.5°  -34.3° -174.0°   10.7° -120.0°  178.8°  -22.7°  161.2°   E17                                              
E18     -72.0°  126.5° -141.0°   40.0°   52.5°  161.6°  141.2°  -80.4°   38.8° -159.6°  -15.9°  150.3°  -78.9°  -20.9°  140.0°  -37.0°  160.1°   E18                                       
E19      72.9°   -9.6° -100.2°  114.9°  127.4°  -64.9°  -95.4°  -49.3°  157.4°  -79.9°  133.2°  -44.7°  126.2°  133.9°  -23.8°  151.7°  -46.3°  118.8°   E19                                
E20     -70.0°   22.6°  -77.5°  147.0°  155.8°   54.9°  -66.3°   58.0° -156.2°  -54.6° -153.8°  -14.5°  138.7° -159.1°   12.5° -170.4°   21.8° -138.4°   32.1°   E20                         
E21      76.9°  141.5° -124.8°  -46.2°  -51.7° -157.6°  124.6°   91.6°   22.6°  142.7°  -11.1°  153.1°  -74.2°  -18.0°  153.2°  -25.4°  163.2°  -17.0°  134.8°  146.9°   E21                  
E22     -90.8°   20.7°  -73.4°  129.0°  131.7°  -39.0°  -71.3°  -72.2° -175.7°  -54.2°  158.3°  -27.9°  115.8°  156.0°  -13.1°  165.0°  -23.5°  145.4°   26.9°  -24.6°  161.7°   E22           
E23      85.2° -135.2°  131.3°  -29.5°  -39.5° -149.5°  137.8°  -93.0°   32.9°  153.4°    7.8°  163.6°  -65.6°    8.4° -149.6°   26.5° -172.2°   13.3° -126.4° -150.7°   17.4° -150.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3m6sc_ :    (SER74)  (THR316)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3m6sa_ :    (SER74)  (THR316)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3m6si_ :    (SER74)  (THR316)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3m6sg_ :    (SER74)  (THR316)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3ubea_ :    (SER83)  (ILE297)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3m6sk_ :    (SER74)  (THR316)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.19