Protein Concepts Dictionary

Tableau information

Concept source:  d4nrra_  amino acid (a.a.) range (GLY11)(ALA355)

nSSEs in this Concept: 23

String of secondary struct.elems. (SSEs) defining this concept: EEEHHEHEHHHHHHHEHHEEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY11)   (TYR15) E1
	   (GLU17)   (ILE21) E2
	   (ARG22)   (GLN28) E3
	   (GLN28)   (ALA34) H4
	   (ARG42)   (MET55) H5
	   (ASN58)   (VAL62) E6
	   (GLU89)  (ASN106) H7
	  (MET107)  (LEU113) E8
	  (GLY122)  (GLY132) H9
	  (ASP146)  (TYR156) H10
	  (PRO163)  (ARG179) H11
	  (ILE187)  (ASP191) H12
	  (ASP191)  (MET195) H13
	  (ALA208)  (ALA222) H14
	  (GLU237)  (ALA243) H15
	  (TYR251)  (TRP257) E16
	  (TRP257)  (GLY262) H17
	  (LEU272)  (ASN294) H18
	  (LYS295)  (MET299) E19
	  (GLU301)  (ASP307) E20
	  (ASP314)  (LEU320) H21
	  (THR325)  (ARG346) H22
	  (SER349)  (ALA355) E23

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                               
E2      121.5°   E2                                                                                                                                                        
E3       84.4°  -51.2°   E3                                                                                                                                                 
H4      -34.3°   87.6°   54.7°   H4                                                                                                                                          
H5     -108.3°  118.0°  167.2° -136.7°   H5                                                                                                                                   
E6      108.8°  -49.3°  -29.3°  -83.2°  140.1°   E6                                                                                                                            
H7      -80.7°  129.8°  161.0°  107.3°  -29.4° -169.5°   H7                                                                                                                     
E8      122.1°  -58.1°  -49.0° -101.7°  121.4°  -19.9° -150.0°   E8                                                                                                              
H9       91.3°   75.0°   36.9°   76.7° -140.6°   26.2° -154.4°  -31.0°   H9                                                                                                       
H10      60.0°  140.3°   92.9°   82.0°  -94.9°   91.3°  -89.8°   86.6°   65.4°   H10                                                                                               
H11     -32.3°  126.2°  111.0°   56.3°  -80.7°  139.0°  -51.3°  154.4°  123.6°  -77.9°   H11                                                                                        
H12    -109.7°  102.0°  152.3°  127.3°   21.7° -140.6°   31.6° -127.6° -156.0° -114.8°   77.8°   H12                                                                                 
H13    -152.3°  -68.8° -116.7°  147.0°   50.8°  -97.0°   74.5°  -85.5° -116.4° -130.8°  120.0°  -43.6°   H13                                                                          
H14       8.0°  128.4°   92.3°   41.9° -100.5°  116.1°  -73.2°  128.0°   97.0°   58.3°  -26.9° -102.9° -146.3°   H14                                                                   
H15      32.5°  122.0°   71.7°   46.6° -119.9°   86.1° -100.7°   93.5°   63.0°   35.4°  -62.3° -132.3° -166.2°  -35.6°   H15                                                            
E16    -117.5°  -24.4°  -70.5°   89.1°  101.2°  -73.7°  106.3°  -81.5°  -99.0°  163.4°  108.6°   81.8°   59.9°  121.7°  133.6°   E16                                                     
H17     147.4°   37.6°   63.1°  115.8°  104.2°   39.8° -131.4°  -32.5°  -62.0° -116.7°  163.5° -100.8°  -57.2°  155.2°  124.9°  -55.2°   H17                                              
H18      73.0°  141.9°  101.8°  -96.7°  -83.9°   93.5°  -85.0°   84.1°   69.4°  -14.7°  -85.8° -105.0° -116.1°  -70.2°  -50.2°  165.2°  110.2°   H18                                       
E19     -92.9°  -38.5°  -64.7°   65.9°  111.9°  -80.2°  104.2°  -94.4° -100.4°  147.4°   88.0°   90.2°   81.6°   97.3°  112.1°  -24.6°   75.5°  161.9°   E19                                
E20    -105.3°  -39.6°  -78.6°   82.1°   96.0°  -87.8°   94.0°  -97.5° -111.6°  164.0°   92.4°   74.7°   65.0°  108.1°  128.6°   16.5°   71.6° -178.1°  -17.4°   E20                         
H21     -38.8° -159.5° -118.0°  -73.1°   74.5° -132.0°   53.5° -131.7° -106.3°  -45.2°  -35.8°   84.9°  125.3°  -31.4°  -47.4°  144.2° -160.6°  -50.4°  123.3°  127.8°   H21                  
H22     -78.9°  156.0°  127.1° -110.5°  -59.1°  115.4°  -61.1°  101.6°   93.5°  -36.0°  -77.7°  -79.9°   99.2°  -73.1°  -67.5°  158.8°  118.5°  -25.3° -164.0°  154.2°  -43.8°   H22           
E23      91.0°   30.5°  -36.4°   57.1°  138.4°  -54.2°  131.9°  -71.5°   72.1°  126.4°  101.4°  117.4°  -96.4°   98.1°   96.3°  -38.2°   64.3°  137.6°  -28.4°  -42.6° -129.4° -162.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4nrsb_ :    (GLY11)  (GLU359)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]
 d4nrrb_ :    (GLY11)  (ALA355)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]
 d4nrra_ :    (GLY11)  (ALA355)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]
 d4lypb_ :    (GLY11)  (ALA355)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1