Protein Concepts Dictionary

Tableau information

Concept source:  d4nsya_  amino acid (a.a.) range (CYS12)(ASP262)

nSSEs in this Concept: 22

String of secondary struct.elems. (SSEs) defining this concept: HHEEEHEEEEEEEEEEHEEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (CYS12)   (HIS18) H1
	   (HIS18)   (VAL25) H2
	   (VAL25)   (SER29) E3
	   (CYS36)   (ASN42) E4
	   (LYS49)   (ALA55) E5
	   (ALA63)   (MET69) H6
	   (MET69)   (ASN74) E7
	  (THR101)  (VAL105) E8
	  (ARG106)  (ALA110) E9
	  (ASP113)  (GLU118) E10
	  (ASN128)  (ARG137) E11
	  (ALA142)  (HIS148) E12
	  (ARG156)  (VAL162) E13
	  (VAL162)  (GLY168) E14
	  (SER176)  (TRP182) E15
	  (GLY186)  (PRO191) E16
	  (PRO191)  (SER196) H17
	  (SER196)  (SER200) E18
	  (ARG223)  (GLY228) E19
	  (ARG229)  (TRP234) H20
	  (SER245)  (ALA250) H21
	  (GLN256)  (ASP262) E22

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                        
H2       96.0°   H2                                                                                                                                                 
E3     -111.7°  -15.8°   E3                                                                                                                                          
E4      -29.4°  121.5°  136.4°   E4                                                                                                                                   
E5      133.7°  -81.3°  -71.3°  143.2°   E5                                                                                                                            
H6     -112.6°  117.7°  108.6°  -86.5°  109.2°   H6                                                                                                                     
E7     -103.7°  151.2°  138.5°  -74.5°   99.2°  -34.8°   E7                                                                                                              
E8       59.3°  -90.0°  -98.7°   76.9°  -74.5°  152.3°  118.1°   E8                                                                                                       
E9      124.3°  -91.9°  -83.5°  129.6°  -13.7°  111.7°   94.1°  -65.7°   E9                                                                                                
E10     -62.7°   86.2°   93.0°  -56.6°  160.2°  -63.5°  -84.4°  121.1° -172.9°   E10                                                                                        
E11      72.5° -101.5° -106.3°  -83.1°   63.0°  138.9°  104.3°  -18.3°   51.9° -135.2°   E11                                                                                 
E12    -109.7°  -41.6°  -37.0°  117.8°  -98.5°   76.3°  110.8° -131.1° -112.2°   62.2° -142.7°   E12                                                                          
E13      74.6°  126.0°  129.2°  -72.7°   70.5° -114.8°  -80.0°   39.1°   57.0° -129.2°   24.6°  166.2°   E13                                                                   
E14     -73.6°   36.0°   47.8° -103.0°   78.4°  152.8° -172.4°  -54.4°   82.0° -100.2°  -68.2°   76.8°   92.4°   E14                                                            
E15     139.0° -119.6° -104.5°  109.6°  -75.5°   34.4°   35.9° -133.4°  -77.3°   97.7°  115.1°  -88.0°   97.0°  147.4°   E15                                                     
E16     -81.7°   14.2°   30.0° -107.9°  -90.7°  124.4°  159.1°  -82.2°  -99.4°   80.2°  -96.6°   49.1° -120.8°  -28.4° -132.9°   E16                                              
H17      16.2°  111.2°  126.8°  -13.6°  138.6°  -99.5°  -87.6°   66.5°  126.2°  -60.7°  -75.7°  117.2°  -70.6°  -89.6°  123.0°  -97.1°   H17                                       
E18      63.5°  154.5°  165.5°   45.0°  101.7°  -85.6°  -54.0°   66.9°   88.4°  -96.3°   59.4°  156.4°  -37.4° -119.2°   85.4° -141.7°  -50.7°   E18                                
E19     -27.8°   68.5°   84.2°  -54.2°  128.6° -121.4° -127.1°   65.3°  126.7°  -58.7°  -83.0°   85.7°  -94.6°  -52.6°  155.7°   54.3°  -42.8°  -91.1°   E19                         
H20     -42.5°   53.5°   69.3°  -69.8°  116.2° -129.8° -142.5°   64.6°  117.5°  -66.5°  -82.8°   77.1°  -99.8°  -38.2° -162.0°   39.3°  -58.1° -104.3°  -15.7°   H20                  
H21     -61.7°  120.0°  125.9°  -38.5° -155.0°  -51.0°  -55.8°  115.4° -147.7°   33.8° -119.3°   91.3° -102.1° -126.4°   82.0°  112.8°  -50.0°  -65.3°  -74.8°  -88.3°   H21           
E22    -113.2°   84.9°   78.3°   98.9° -112.5°  -33.4°  -68.2°  170.4° -122.4°   50.7° -171.2°   43.3° -148.2°  119.4°  -56.1°   91.0°  108.0° -116.3°  105.2°  106.0°   61.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4nsya_ :    (CYS12)  (ASP262)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |automated matches |Lysobacter enzymogenes [TaxId: 69]
 d1arba_ :    (CYS12)  (ASP262)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Achromobacter protease |Achromobacter lyticus, strain m497-1 [TaxId: 224]
 d4nsva_ :    (CYS12)  (ASP262)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |automated matches |Lysobacter enzymogenes [TaxId: 69]
 d4nsyb_ :    (CYS12)  (ASP262)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |automated matches |Lysobacter enzymogenes [TaxId: 69]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47