Protein Concepts Dictionary

Tableau information

Concept source:  d2ez2a_  amino acid (a.a.) range (LEU160)(TYR455)

nSSEs in this Concept: 22

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEHEHHHEHHEHEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU160)  (GLY171) H1
	  (TYR177)  (THR183) E2
	  (MET194)  (GLY208) H3
	  (LYS210)  (THR216) E4
	  (CYS218)  (GLU227) H5
	  (SER236)  (SER246) H6
	  (ASP249)  (SER254) E7
	  (GLY255)  (LEU260) H8
	  (GLY264)  (ASN270) E9
	  (ASP271)  (TYR285) H10
	  (GLY296)  (ALA309) H11
	  (TYR312)  (GLY333) H12
	  (ALA344)  (ASP348) E13
	  (ASP348)  (CYS353) H14
	  (PHE361)  (VAL372) H15
	  (VAL376)  (GLY382) E16
	  (GLY382)  (GLY387) H17
	  (LYS399)  (ARG409) E18
	  (TYR414)  (GLN429) H19
	  (ARG435)  (PHE439) E20
	  (ILE440)  (LYS444) E21
	  (ALA451)  (TYR455) E22

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                        
E2      162.4°   E2                                                                                                                                                 
H3      -14.8° -172.6°   H3                                                                                                                                          
E4      136.4°  -26.0°  149.4°   E4                                                                                                                                   
H5     -128.1°   68.9° -116.4°   94.2°   H5                                                                                                                            
H6      -20.8°  162.9°   22.6°  145.5°  110.5°   H6                                                                                                                     
E7      114.2°  -48.5°  128.5°  -23.5°  112.9°  122.0°   E7                                                                                                              
H8     -155.7°   36.2° -142.6°   58.8°   50.7° -155.5°  -82.3°   H8                                                                                                       
E9      -65.0°  132.3°  -50.8°  157.6°   67.5°  -56.8° -178.6°   98.8°   E9                                                                                                
H10      89.6°  -73.0°  103.7°  -47.2°  136.4°   99.8°  -24.8° -104.7°  154.5°   H10                                                                                        
H11    -127.7°   68.5° -117.4°   92.9°   -6.7°  108.8°  109.8°   54.4°  -70.3°  132.3°   H11                                                                                 
H12     102.0°   75.2°  110.4°   73.4°  -78.5°   87.9°   65.7°  101.2° -113.1°   71.9°  -71.9°   H12                                                                          
E13      83.0°  -97.3°   88.9°   96.3°  -80.0°   66.2°   85.5° -117.4°  -93.2°   84.6°  -73.6°  -23.1°   E13                                                                   
H14     111.1°   60.9°  123.0°   53.8°   87.5°  102.1°   45.4°   93.3° -133.5°   55.2°   81.4°   20.6°   42.5°   H14                                                            
H15    -136.4°   29.5° -143.2°   21.2°   94.6° -154.7°  -39.4°   48.2°  142.0°  -57.5°   95.7°   94.2°  117.2°   75.0°   H15                                                     
E16      43.5° -149.7°   37.6° -156.5°  -86.0°   24.5°  138.3° -133.1°  -40.3°  120.7°  -84.6°  -83.7°  -60.6° -102.8° -177.6°   E16                                              
H17     -29.3°  146.6°  -26.1°  129.8° -129.8°  -47.2°  116.5° -128.1°  -63.5°   93.8° -133.6° -130.7° -112.2° -135.3° -117.8°  -63.2°   H17                                       
E18    -116.3°   60.0° -113.3°  -60.4°   96.4° -135.5°  -74.2°   48.6°  107.2°  -82.0°  101.5°  133.1°  156.3°  114.2°  -39.3°  143.0°   88.3°   E18                                
H19      77.9°  -99.3°   86.0°   93.4°  -90.5°   63.7°   79.3° -124.5°  -99.3°   75.3°  -84.1°  -24.4°  -10.7°  -40.1°  114.6°  -63.1°  106.9°  153.2°   H19                         
E20     -24.7°  147.3°  -25.4°  127.1° -135.6°  -44.3°  111.4°  134.2°  -68.4°   88.0° -138.7° -124.5° -107.3° -128.1°  117.8°  -63.0°    7.3°   91.8° -101.2°   E20                  
E21     -56.6°  134.4°  -43.0°  143.1°  -92.2°  -62.1°  147.3°  -99.7°  -33.4°  130.3°  -97.1° -143.4° -120.6° -162.9°  122.0°  -60.2°  -38.7°   82.8° -122.8°  -45.6°   E21           
E22     120.4°  -56.6°  129.1°  -58.3°   70.8°  106.6°  -57.0°  -83.3°  122.2°  -70.9°   64.8°   18.8°   40.9°  -16.6°  -78.0°  100.1°  148.2° -115.7°   43.2°  141.4° -155.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ycna_ :   (LEU160)  (TYR455)   [view usage] : c.67.1.2 |PLP-dependent transferase-like |PLP-dependent transferases |Beta-eliminating lyases |automated matches |Citrobacter freundii [TaxId: 546]
 d2c44a1 :   (ASP172)  (GLU470)   [view usage] : c.67.1.2 |PLP-dependent transferase-like |PLP-dependent transferases |Beta-eliminating lyases |Tryptophan indol-lyase (tryptophanase) |Escherichia coli [TaxId: 562]
 d2c44c_ :   (ASP172)  (GLU470)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d2ez2a_ :   (LEU160)  (TYR455)   [view usage] : c.67.1.2 |PLP-dependent transferase-like |PLP-dependent transferases |Beta-eliminating lyases |automated matches |Citrobacter freundii [TaxId: 546]
 d2ycta_ :   (LEU160)  (TYR455)   [view usage] : c.67.1.2 |PLP-dependent transferase-like |PLP-dependent transferases |Beta-eliminating lyases |automated matches |Citrobacter freundii [TaxId: 546]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67