Protein Concepts Dictionary

Tableau information

Concept source:  d1r9za2  amino acid (a.a.) range (PRO56)(ASN362)

nSSEs in this Concept: 22

String of secondary struct.elems. (SSEs) defining this concept: EHHHEHHEHEHEHEHEHHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO56)   (HIS61) E1
	   (THR69)   (ASN74) H2
	   (THR80)   (ARG91) H3
	   (THR96)  (GLY115) H4
	  (GLN117)  (SER126) E5
	  (LEU130)  (GLU142) H6
	  (VAL143)  (ASP148) H7
	  (ASP148)  (GLU157) E8
	  (ASN164)  (GLY176) H9
	  (VAL179)  (ILE183) E10
	  (THR189)  (TYR207) H11
	  (LEU210)  (HIS214) E12
	  (PHE225)  (GLU236) H13
	  (VAL242)  (HIS246) E14
	  (GLY255)  (GLY269) H15
	  (ILE270)  (PRO276) E16
	  (PRO276)  (ASP287) H17
	  (VAL298)  (SER304) H18
	  (ILE306)  (HIS312) E19
	  (MET327)  (GLN339) H20
	  (GLY342)  (GLY349) H21
	  (HIS355)  (ASN362) H22

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                        
H2       42.1°   H2                                                                                                                                                 
H3      -93.2°   76.0°   H3                                                                                                                                          
H4      141.1°  136.5°  125.6°   H4                                                                                                                                   
E5       13.9°  -40.5°  -79.5°  154.9°   E5                                                                                                                            
H6     -175.7°  139.6°   84.2°  -41.9° -162.7°   H6                                                                                                                     
H7      -90.3° -115.6° -165.1°   53.3° -102.9°  -91.4°   H7                                                                                                              
E8      -10.4°  -44.3° -103.0°  131.0°  -24.3°  172.8°   81.6°   E8                                                                                                       
H9      158.9°  131.0°   66.6°  -59.7°  145.0°  -17.8° -107.7°  169.2°   H9                                                                                                
E10     -38.3°  -48.7° -123.0°  106.2°  -51.2°  145.8°   67.0°  -28.5°  160.5°   E10                                                                                        
H11     138.4°  131.0°   55.8°  -76.4°  125.7°  -37.5° -113.4°  148.0°  -23.2°  176.3°   H11                                                                                 
E12     -54.4°  -41.9° -116.0°   99.5°  -64.0°  129.9°   77.6°  -46.9°  139.1°  -23.5°  159.6°   E12                                                                          
H13     121.9°  142.8°   71.6°  -78.8°  114.3°  -54.0°  -94.2°  127.9°  -47.6°  148.1°  -29.1°  170.7°   H13                                                                   
E14     -71.2°  -46.4°  109.8°   90.4°  -78.6°  112.8°   85.1°  -65.0°  120.2°  -42.5°  140.8°  -19.1° -166.8°   E14                                                            
H15     126.3°  123.8°   47.9°  -87.9°  113.7°  -49.6° -119.5°  136.0°  -34.6°  164.5°  -12.1° -161.9°   27.3° -146.5°   H15                                                     
E16     -85.6°  -48.5°   90.4°   90.6°  -88.3°   97.8°  104.3°  -82.4°  100.1°  -64.9°  118.0°  -41.6°  146.9°  -24.0° -122.6°   E16                                              
H17      27.5°   50.8° -118.8°  114.4°   41.2° -156.1°  -68.0°   17.1° -173.5°   13.7°  162.6°   36.4°  136.1°  -55.5°  151.6°  -76.8°   H17                                       
H18     126.5°  164.7°  -97.0°  -58.5°  125.4°  -50.8°  -69.4°  127.1°  -54.4°  132.5°  -46.5°  146.9°  -25.8° -147.6°  -50.2° -146.2°  125.9°   H18                                
E19     -84.0°  -43.0°   54.0°  114.5°  -78.1°   97.1°  140.9°  -87.4°   88.5°  -85.8°   95.5°  -67.7°  121.5°  -56.4°   94.3°  -36.7°   92.2° -141.6°   E19                         
H20      65.3°   89.8° -157.9°  -76.3°   78.8° -117.0°  -26.6°   55.9° -134.0°   41.1° -138.7°   56.3° -114.6°   69.3° -141.8°   92.6°   41.4°  -92.5°  123.9°   H20                  
H21     -92.0°  -82.5°  -11.6° -126.5°  -78.1°  -84.7°  153.8° -102.4°   66.9° -126.3°   51.7° -124.1°   62.6° -120.3°   41.8° -101.9°  119.1°   88.5°  -65.3°  152.2°   H21           
H22      56.8°   82.1°  -62.2° -140.3°   47.3° -118.9° -108.4°   65.5° -105.7°   93.7°  -82.7°  110.9°   67.0° -125.6°   71.0° -129.1°   80.6°   82.7° -100.6°   99.7°  -52.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1r9za2 :    (PRO56)  (ASN362)   [view usage] : c.1.9.5 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Cytosine deaminase catalytic domain |Cytosine deaminase catalytic domain |Escherichia coli [TaxId: 562]
 d1k6wa2 :    (PRO56)  (ASN362)   [view usage] : c.1.9.5 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Cytosine deaminase catalytic domain |Cytosine deaminase catalytic domain |Escherichia coli [TaxId: 562]
 d1r9ya2 :    (PRO56)  (ASN362)   [view usage] : c.1.9.5 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Cytosine deaminase catalytic domain |Cytosine deaminase catalytic domain |Escherichia coli [TaxId: 562]
 d1r9xa2 :    (PRO56)  (ASN362)   [view usage] : c.1.9.5 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Cytosine deaminase catalytic domain |Cytosine deaminase catalytic domain |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1