Protein Concepts Dictionary

Tableau information

Concept source:  d4do3a_  amino acid (a.a.) range (ALA275)(PRO574)

nSSEs in this Concept: 22

String of secondary struct.elems. (SSEs) defining this concept: EHHHEHEHHHHHHHEHHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA275)  (ARG285) E1
	  (VAL287)  (LEU298) H2
	  (GLU300)  (ASP306) H3
	  (ARG315)  (SER321) H4
	  (ARG326)  (THR332) E5
	  (SER339)  (GLY357) H6
	  (GLY357)  (PRO362) E7
	  (ASN367)  (SER382) H8
	  (GLY385)  (LYS393) H9
	  (ASP403)  (LEU410) H10
	  (PRO411)  (LEU422) H11
	  (LEU422)  (PRO427) H12
	  (PRO427)  (ARG437) H13
	  (SER440)  (ASN466) H14
	  (ASP468)  (PRO473) E15
	  (ALA487)  (TYR493) H16
	  (VAL495)  (LEU500) H17
	  (PRO503)  (PRO508) E18
	  (THR513)  (TYR523) H19
	  (ASP529)  (LYS540) H20
	  (LEU545)  (LEU554) E21
	  (GLN557)  (PRO574) H22

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                        
H2      120.8°   H2                                                                                                                                                 
H3      151.8°  -54.9°   H3                                                                                                                                          
H4      -66.1°  170.1°  122.9°   H4                                                                                                                                   
E5      -99.5°  117.4°   66.8°  -65.6°   E5                                                                                                                            
H6       75.0°  -79.9° -125.4°   96.1° -161.3°   H6                                                                                                                     
E7     -142.7°   87.5°   33.4°  -89.6°  -43.3° -138.3°   E7                                                                                                              
H8      -99.9°   46.7°   55.6° -142.0°  -83.5°  114.9°  -81.6°   H8                                                                                                       
H9      -59.8°   94.5°   92.1°  -95.2°  -65.3°  123.2°  -97.2°   50.0°   H9                                                                                                
H10    -170.2°  -51.1°  -31.9°  121.2°   89.8°  -97.0°   46.9°  -78.0° -122.7°   H10                                                                                        
H11      75.4° -147.8° -124.2°   23.1°   83.1°  -78.2°  -93.3°  164.9°  117.2° -109.0°   H11                                                                                 
H12      35.8° -114.0° -167.6°   66.9°  125.5°  -42.5° -154.6°  122.7°   94.5° -138.3°  -61.2°   H12                                                                          
H13    -113.4°   13.8°   55.1° -175.2° -110.1°   88.3°   88.4°  -33.3°  -80.7°  -59.9° -161.5° -115.8°   H13                                                                   
H14      53.3° -122.0° -154.9°   55.0°  120.4°  -42.1°  134.0° -144.4° -112.9°  124.0°   42.4°  -22.3° -128.9°   H14                                                            
E15     -78.8°  128.0°   84.8°  -58.3°  -20.8°  149.3°  -64.1°  -84.9°  -51.5°  110.4°   80.1°  107.5° -116.9°  108.3°   E15                                                     
H16      77.3°  -73.5° -120.9°  102.7° -167.9°    6.7°  138.0°  108.5°  120.9°  -94.2°  -84.8°  -46.8°   81.7°  -48.4° -154.3°   H16                                              
H17     123.6°  -29.7°  -68.3°  141.2°  134.6°  -57.9°   93.2°   76.4°  122.6°  -46.6° -118.3°  -99.4°   43.3°  -98.3°  152.7°  -52.8°   H17                                       
E18     -37.4°  151.1°  131.2°  -38.6°  -65.4°  103.2° -106.6° -109.3°  -59.4°  152.4°   58.3°   61.1° -138.4°   65.5°  -46.4°  107.8°  159.9°   E18                                
H19    -153.1°  -82.5°  -32.6°   92.8°  -55.0°  125.9°  -12.4°  -86.5° -108.8°   36.7°   91.6°  150.6°  -86.2°  128.4°  -75.8°  125.6°   83.2° -115.9°   H19                         
H20      -6.2°  115.9°  146.5°  -71.5°  -99.6°   76.9° -142.8°   93.8°   54.9° -166.8°   81.6°   39.8°  107.8°  -58.6°  -78.7°  -78.5°  121.7°  -40.4° -154.4°   H20                  
E21     127.4°  -41.7°  -70.6°  128.9°  133.1°  -55.0°   89.9°   88.3°  135.5°  -43.4° -106.1°  -97.5°   55.5°  -91.8°  153.8°  -51.2°   12.9°  157.2°   78.5°  127.0°   E21           
H22     -41.3° -160.7°  134.9°  -28.4°  -68.2°   97.9° -105.9° -120.4°  -70.5°  147.6°   47.2°   57.4° -149.0°   57.6°  -51.5°  103.2°  155.7°  -11.1°  113.3°  -45.6°  148.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3qj9b_ :   (ALA275)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4do3b_ :   (ALA275)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3qj8a_ :   (ALA275)  (THR573)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3pr0b_ :   (ALA275)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2wj1a_ :   (GLN277)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2wj1b_ :   (GLN277)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4j5pa_ :   (GLN277)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3lj7b_ :   (ALA275)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3oj8b_ :   (ALA275)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3oj8a_ :   (ALA275)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3k7fa_ :   (ALA275)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4do3a_ :   (ALA275)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3qj8b_ :   (ALA275)  (THR573)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3qk5b_ :   (ALA275)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2wj2a_ :   (ALA275)  (PRO574)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.117