Protein Concepts Dictionary

Tableau information

Concept source:  d1psca_  amino acid (a.a.) range (PHE51)(THR350)

nSSEs in this Concept: 22

String of secondary struct.elems. (SSEs) defining this concept: EHHEHEHHEHEHEHEHHHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PHE51)   (HIS55) E1
	   (GLY64)   (TRP69) H2
	   (SER75)   (GLY94) H3
	   (ARG96)  (VAL101) E4
	  (VAL110)  (ASP121) H5
	  (HIS123)  (PHE132) E6
	  (PRO135)  (ARG141) H7
	  (SER142)  (GLY157) H8
	  (ILE167)  (THR173) E9
	  (THR177)  (ALA193) H10
	  (VAL196)  (THR202) E11
	  (ASP208)  (GLY220) H12
	  (ARG225)  (HIS230) E13
	  (LEU237)  (GLY247) H14
	  (GLY247)  (ASP253) E15
	  (ILE260)  (ASN265) H16
	  (SER269)  (GLY273) H17
	  (SER276)  (GLY291) H18
	  (ILE296)  (ASN300) E19
	  (VAL310)  (ASN321) H20
	  (PHE327)  (GLY340) H21
	  (GLU344)  (THR350) H22

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                        
H2       85.3°   H2                                                                                                                                                 
H3      137.2°  125.5°   H3                                                                                                                                          
E4      -15.7°   99.0°  129.8°   E4                                                                                                                                   
H5      156.6°   81.5°  -45.7°  168.4°   H5                                                                                                                            
E6      -18.1°  102.2°  119.9°  -14.2°  154.4°   E6                                                                                                                     
H7      -89.0°  172.8°  -61.6°  -74.8° -105.3°  -72.6°   H7                                                                                                              
H8      150.6°   67.1°  -70.8°  158.0°  -31.7°  168.8° -117.7°   H8                                                                                                       
E9      -40.2°   89.9°  104.4°  -48.3°  120.3°  -35.4°  -88.4°  143.0°   E9                                                                                                
H10     150.0° -107.0°  -56.2°  136.3°  -53.2°  143.9°   76.2°  -43.5° -159.4°   H10                                                                                        
E11     -54.1°   72.0°  103.6°  -66.3°  103.2°  -55.5° -107.9°  120.9°  -22.5° -155.4°   E11                                                                                 
H12     101.3° -122.5°  -86.8°   87.5° -102.1°   97.2°   54.6°  -86.4°  130.5°  -48.9°  152.6°   H12                                                                          
E13     -65.3°   53.0°  107.2°  -80.0°   91.3°  -72.0° -127.8°  102.4°  -42.4°  143.6°  -20.5°  165.2°   E13                                                                   
H14     117.3° -117.4°  -77.3°  103.8°  -86.0°  113.5°   61.8°  -70.8°  145.6°  -32.7°  168.1°   16.4° -170.4°   H14                                                            
E15     -83.6°   17.8°  116.4°  -99.0°   77.9°  -97.8° -164.6°   73.1°  -77.2°  116.2°  -56.9°  140.2°  -36.8° -133.6°   E15                                                     
H16     -25.4°   65.4° -162.5°  -34.6°  146.8°  -43.0° -107.9°  126.0°  -59.7°  138.0°  -65.0°   98.2°  -67.0°  111.1°   69.7°   H16                                              
H17     122.8° -151.9°  -32.5°  109.0°  -71.7°  105.6°   34.2°  -85.4°  110.5°  -49.6°  121.7°  -57.9°  133.9°  -53.7° -148.3° -141.4°   H17                                       
H18     115.2° -155.9°  -47.0°  100.1°  -82.8°   99.9°   27.6°  -90.2°  113.8°  -49.0°  129.8°  -44.3°  145.7°  -43.0° -160.7° -129.3°   14.7°   H18                                
E19     -73.0°   12.4°  136.5°  -86.6°   93.6°  -90.2° -161.1°   79.0°  -81.5°  116.9°  -66.3°  122.3°  -49.6°  121.3°  -21.7°   53.2° -164.2° -164.0°   E19                         
H20     149.3° -102.9°   22.7°  148.8°  -23.9°  136.0°   84.2°  -53.1°  109.5°  -55.9°   99.9°  -99.0°   95.8°  -85.4°   95.4°  162.7°  -52.9°  -66.4° -114.2°   H20                  
H21     109.5°  131.1°  -28.5°  105.3°  -66.8°   93.2°  -55.1°  -96.6°   76.5°  -83.4°   80.0° -100.7°   90.2°  -97.1°  115.0° -134.3°  -43.6°  -56.4°  136.1°   43.6°   H21           
H22      52.0°  -82.3° -146.7°   47.5° -143.4°   61.7°   90.8°  111.8°  -92.2°  101.5° -102.6°   60.9° -104.5°   72.9°  -95.2°   38.2°  114.6°   99.9°  -73.8° -157.5°  143.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1dpma_ :    (PHE51)  (THR350)   [view usage] : c.1.9.3 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Phosphotriesterase-like |Phosphotriesterase (parathion hydrolase, PTE) |Pseudomonas diminuta [TaxId: 293]
 d1psca_ :    (PHE51)  (THR350)   [view usage] : c.1.9.3 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Phosphotriesterase-like |Phosphotriesterase (parathion hydrolase, PTE) |Pseudomonas diminuta [TaxId: 293]
 d4e3tb_ :    (PHE51)  (ILE349)   [view usage] : c.1.9.3 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Phosphotriesterase-like |automated matches |Brevundimonas diminuta [TaxId: 293]
 d1hzya_ :    (PHE51)  (LEU358)   [view usage] : c.1.9.3 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Phosphotriesterase-like |Phosphotriesterase (parathion hydrolase, PTE) |Pseudomonas diminuta [TaxId: 293]
 d2d2ga1 :    (PHE51)  (VAL349)   [view usage] : c.1.9.3 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Phosphotriesterase-like |Phosphotriesterase (parathion hydrolase, PTE) |Agrobacterium tumefaciens [TaxId: 358]
 d1pscb_ :    (PHE51)  (THR350)   [view usage] : c.1.9.3 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Phosphotriesterase-like |Phosphotriesterase (parathion hydrolase, PTE) |Pseudomonas diminuta [TaxId: 293]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1