Protein Concepts Dictionary

Tableau information

Concept source:  d3lchd_  amino acid (a.a.) range (GLY7)(ARG296)

nSSEs in this Concept: 22

String of secondary struct.elems. (SSEs) defining this concept: EHEHHHEHEHEHEHEHEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLY7)   (ASP17) E1
	   (LYS24)   (GLN36) H2
	   (ASP40)   (GLY45) E3
	   (GLU50)   (GLN54) H4
	   (SER57)   (GLU69) H5
	   (ALA70)   (LYS75) H6
	   (LYS75)   (GLY81) E7
	   (SER84)   (GLY99) H8
	  (ALA102)  (VAL106) E9
	  (SER114)  (ASP130) H10
	  (PRO133)  (ILE139) E11
	  (THR148)  (LEU158) H12
	  (GLY162)  (SER168) E13
	  (LEU171)  (PRO182) H14
	  (VAL185)  (TYR190) E15
	  (PHE194)  (GLY201) H16
	  (ASP203)  (GLY207) E17
	  (GLY207)  (ILE212) H18
	  (TRP215)  (GLY227) H19
	  (ASP228)  (THR249) H20
	  (ARG251)  (ASP263) H21
	  (ASP278)  (ARG296) H22

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                        
H2      158.7°   H2                                                                                                                                                 
E3      -46.5°  149.8°   E3                                                                                                                                          
H4       51.7° -145.9°  -45.2°   H4                                                                                                                                   
H5      121.6°  -45.2°  164.2°  120.6°   H5                                                                                                                            
H6      141.8°   39.7° -111.5° -141.7°   84.2°   H6                                                                                                                     
E7      -61.4°  132.3°  -17.8°  -60.0° -176.7°   93.7°   E7                                                                                                              
H8      104.8°  -64.9°  143.9°  102.0°  -20.2° -104.3°  161.4°   H8                                                                                                       
E9      -70.4°  111.7°  -46.5°  -91.7°  146.6°   73.3°  -33.9°  158.0°   E9                                                                                                
H10      83.8°  -91.7°  115.2°   72.9°  -49.1° -131.3°  132.1°  -29.3°  154.1°   H10                                                                                        
E11     -73.5°   99.9°  -66.4° -110.1°  124.2°   68.4°  -56.9°  134.5°  -23.8°  145.2°   E11                                                                                 
H12      86.6°  -95.9°  105.3°   60.3°  -60.4° -131.6°  119.9°  -43.2°  151.5°  -19.1°  158.7°   H12                                                                          
E13     -73.0°   96.2°  -75.4° -116.5°  113.4°   70.7°  -68.1°  122.1°  -36.0°  134.3°  -12.5°  151.0°   E13                                                                   
H14     121.9°  -70.7°  111.9°   75.5°  -63.0°  -94.2°  114.8°  -60.0°  141.2°  -55.9°  158.7°  -42.0°  164.9°   H14                                                            
E15     -56.1°  109.9°  -69.8° -104.1°  114.2°   88.7°  -68.1°  116.2°  -42.8°  119.8°  -25.5°  134.0°  -18.2° -175.7°   E15                                                     
H16     143.8°  -56.7°  107.0°  -92.4°  -77.8°  -62.8°   99.1°  -85.4°  111.4°  -90.4°  123.4°  -77.4°  130.8°  -35.4°  148.6°   H16                                              
E17     -12.5°  149.0°  -49.7°   63.6°  121.6°  130.8°  -61.6°  107.9°  -63.0°   91.3°  -62.5°   96.9°  -60.9°  134.1°  -43.7°  154.2°   E17                                       
H18     -75.0°   87.2° -121.4°  100.7°   47.8°  117.1° -135.4°   37.7° -123.1°   44.1° -103.4°  -63.0°   91.3°  -95.4°   80.4° -123.0°  -73.8°   H18                                
H19     172.6°  -20.6°  131.0° -133.1°  -62.3°   30.9°  114.8°  -80.3°  102.9° -102.8°   99.1° -100.7°   99.8°  -65.2°  116.9°  -40.7°  160.6°  107.3°   H19                         
H20      22.6°  163.4°  -24.9°   49.0°  144.2° -125.9°  -38.8°  126.7°  -52.7°  102.7°  -63.5°  100.4°  -67.8°  124.4°  -55.5°  130.5°   25.0°   97.2° -153.0°   H20                  
H21     -79.9°   85.6° -124.6°  -94.3°   41.8°  121.1° -141.2°   26.7° -136.4°  -30.5°  117.4°  -49.6°  105.4°  -81.7°   94.1° -111.4°  -81.5°   14.0°  104.0°  102.5°   H21           
H22    -131.6°   44.9° -152.0° -108.6°  -22.4°   83.3°  154.9°  -29.1°  156.5°  -48.4°  141.2°  -51.2°  132.6°  -41.2°  136.4°  -57.5° -136.6°  -65.8°   54.6° -150.8°  -55.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3lcia_ :     (GLY7)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3lclc_ :     (GLY7)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3lchd_ :     (GLY7)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3lcgb_ :     (GLY7)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1hl2b_ :     (GLY7)  (GLU295)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |N-acetylneuraminate lyase |Escherichia coli [TaxId: 562]
 d2wnqa_ :     (VAL8)  (GLY297)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli [TaxId: 562]
 d3lbcc_ :     (GLY7)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4bwld_ :     (GLY7)  (ASP263)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d3lchb_ :     (GLY7)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3lcid_ :     (GLY7)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3lcla_ :     (GLY7)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2wo5c_ :    (ALA11)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli [TaxId: 469008]
 d2wo5d_ :    (ALA11)  (ASP263)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli [TaxId: 469008]
 d3lcfb_ :     (GLY7)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2wnqd_ :     (GLY7)  (GLU295)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli [TaxId: 562]
 d1hl2a_ :     (GLY7)  (GLU295)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |N-acetylneuraminate lyase |Escherichia coli [TaxId: 562]
 d3lcfa_ :     (GLY7)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3lchc_ :     (GLY7)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3lclb_ :     (GLY7)  (ARG296)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1