Protein Concepts Dictionary

Tableau information

Concept source:  d1qvsa_  amino acid (a.a.) range (ASP1)(GLU284)

nSSEs in this Concept: 22

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHHEHHEHHEHEHEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASP1)    (GLY7) E1
	   (LYS10)   (GLN22) H2
	   (ILE26)   (SER32) E3
	   (SER35)   (GLU45) H4
	   (ASP52)   (GLU57) E5
	   (GLN58)   (GLY69) H6
	   (SER75)   (GLN81) H7
	   (ASP94)  (ASP108) E8
	  (SER120)  (THR126) H9
	  (THR126)  (LYS130) H10
	  (ILE133)  (THR138) E11
	  (ALA141)  (LYS151) H12
	  (VAL157)  (GLU167) H13
	  (ASN168)  (ALA173) E14
	  (ASN175)  (GLY185) H15
	  (PRO188)  (ILE192) E16
	  (TYR195)  (GLY205) H17
	  (LYS210)  (HIS218) E18
	  (ALA223)  (ALA235) E19
	  (GLN239)  (SER251) H20
	  (SER251)  (ARG262) H21
	  (PRO279)  (GLU284) H22

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                        
H2      162.0°   H2                                                                                                                                                 
E3      -28.0°  168.1°   E3                                                                                                                                          
H4     -128.2°  -58.7°  110.0°   H4                                                                                                                                   
E5      -31.6°  136.4°  -55.5° -157.5°   E5                                                                                                                            
H6      117.9°  -66.8°  102.7°  -11.2°  146.3°   H6                                                                                                                     
H7      -42.6°  130.4°  -61.0° -170.7°  -15.2° -160.4°   H7                                                                                                              
E8      -38.2°  137.3°  -53.7° -163.7°  -17.3° -155.5°   -8.2°   E8                                                                                                       
H9      -42.4°  150.0°  -33.6° -130.8°   48.1° -128.3°   43.2°   35.2°   H9                                                                                                
H10     -80.7°  108.7°  -74.2° -127.1°   69.2° -134.6°   55.2°   52.0°  -41.4°   H10                                                                                        
E11    -120.5°  -74.3°   93.9°  -30.8°  148.7°  -36.5°  146.1°  138.3° -103.2°  -98.1°   E11                                                                                 
H12      70.5°  -97.3°   83.5°   79.0°  -81.9°   69.2°  -96.7°  -98.6° -112.2° -150.1° -103.1°   H12                                                                          
H13     -71.4°  114.9°  -70.5° -140.1°   56.5° -147.0°   42.2°   39.6°   36.9°  -13.0° -110.6°  138.2°   H13                                                                   
E14    -140.2°   57.6° -114.2°  -58.1°  141.0°  -68.6°  126.5°  123.9° -100.7°   71.9°  -40.3° -136.8°  -84.5°   E14                                                            
H15      62.0°  107.6°  -84.1° -163.8°   30.4°  161.8°   23.6°   31.7°   65.4°   63.3°  161.2°   95.3°   51.2°  124.3°   H15                                                     
E16     136.5°  -51.4°  117.0°    8.4° -165.5°  -19.4°  177.3°  169.2° -134.1° -122.9°  -31.2°   84.8° -135.9°  -52.0° -158.7°   E16                                              
H17    -107.5°   73.0° -113.9°  122.5°  -80.0°  133.6°   66.0°   69.4°   80.4°   43.1°  110.8° -140.0°   43.6°   70.8°  -54.2°  114.2°   H17                                       
E18      91.4°  -81.0°   95.3°  -53.2°  107.6°  -43.9° -122.5°  123.9°  128.6° -169.2°  -79.4°   25.9°  162.7° -110.9°  119.4°  -58.9° -147.6°   E18                                
E19     143.7°  -49.9°  118.2°   23.5°  172.6°   34.4°  161.3°  156.9° -124.6° -106.2°   24.5°  101.8° -119.1°  -35.0° -153.1°   17.0° -100.5°  -75.9°   E19                         
H20     -55.8°  110.8°  -81.1° -157.3°  -25.6° -150.9°   26.0°   33.9°   69.1°   74.4°  171.9°  -82.8°   61.7°  136.6°   12.5° -156.7°   66.0° -107.4° -160.4°   H20                  
H21     -45.0°  145.0°  -40.1°  136.7°  -45.2°  135.0°  -38.2°  -30.6°    7.1°  -36.6°  107.9° -115.4°  -30.5°  100.6°  -59.5°  139.1°  -73.8°  134.1°  127.7°  -64.2°   H21           
H22      25.3° -146.1°   35.7° -105.5°   52.3°  -94.5°   65.9°   62.7°   63.7°  104.5° -108.0°  -48.9°   96.3° -143.4°   81.1° -113.8°  131.8°  -66.8° -125.8°   71.5°   68.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3kn7a_ :     (ASP1)  (GLU284)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Haemophilus influenzae [TaxId: 727]
 d2o6aa_ :     (ASP1)  (GLU284)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Haemophilus influenzae [TaxId: 727]
 d2o69a_ :     (ASP1)  (GLU284)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Haemophilus influenzae [TaxId: 727]
 d1qvsa_ :     (ASP1)  (GLU284)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Haemophilus influenzae [TaxId: 727]
 d1nnfa_ :     (ASP1)  (GLU284)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Haemophilus influenzae [TaxId: 727]
 d2o68a_ :     (ASP1)  (GLU284)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Haemophilus influenzae [TaxId: 727]
 d1qw0a_ :     (ASP1)  (GLU284)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Haemophilus influenzae [TaxId: 727]
 d3kn8a_ :     (ASP1)  (GLU284)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Haemophilus influenzae [TaxId: 727]
 d1d9va_ :     (ASP1)  (GLU284)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Haemophilus influenzae [TaxId: 727]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.94