Protein Concepts Dictionary

Tableau information

Concept source:  d2h6hb1  amino acid (a.a.) range (PRO528)(PRO919)

nSSEs in this Concept: 21

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHHHHHHHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO528)  (ARG534) H1
	  (THR542)  (SER561) H2
	  (GLU576)  (GLN588) H3
	  (THR590)  (LEU596) H4
	  (ARG600)  (ASP615) H5
	  (GLN620)  (GLN634) H6
	  (LEU650)  (GLY664) H7
	  (THR665)  (ILE671) H8
	  (ARG674)  (LYS685) H9
	  (VAL701)  (ASN715) H10
	  (THR718)  (GLU723) H11
	  (THR725)  (ARG731) H12
	  (GLY749)  (GLY755) H13
	  (LEU756)  (LEU762) H14
	  (LEU770)  (GLN781) H15
	  (ASP797)  (GLY819) H16
	  (GLN833)  (CYS843) H17
	  (PHE860)  (GLN874) H18
	  (GLN874)  (GLY879) E19
	  (MET881)  (LEU887) E20
	  (GLY904)  (PRO919) H21

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                 
H2     -164.2°   H2                                                                                                                                          
H3       47.3°  122.0°   H3                                                                                                                                   
H4       53.5° -138.7°  -67.8°   H4                                                                                                                            
H5      158.0°  -36.7° -151.3°  114.3°   H5                                                                                                                     
H6       14.0°  166.6°   45.1°  -40.4° -152.2°   H6                                                                                                              
H7      165.0°  -19.3° -118.9° -119.5°   33.4° -153.6°   H7                                                                                                       
H8       10.8°  172.0°   50.0°  -42.8° -150.5°    6.3° -159.3°   H8                                                                                                
H9       41.9° -146.6°   89.2°   60.4° -117.3°   46.6° -150.5°   40.6°   H9                                                                                         
H10     131.8°  -48.8°  -89.4°  -95.5°   61.9° -120.8°   33.4° -126.9° -154.2°   H10                                                                                 
H11      59.6° -121.8°  102.7°   89.6° -105.9°   69.7° -135.4°   63.4°   29.2° -167.9°   H11                                                                          
H12      83.3°  -97.3°  121.5°  110.7°  -85.5°   94.1° -111.5°   87.9°   52.2° -144.9°   24.6°   H12                                                                   
H13     102.2°  -84.3°  -77.9°  -57.3°   80.2°  -88.6°   65.6°  -93.8° -116.6°   38.3° -144.5° -153.8°   H13                                                            
H14     105.0°  -81.7°  -80.1°  -59.5°   77.5°  -91.4°   62.9°  -96.5° -118.5°   36.1° -145.9° -152.9°   -2.8°   H14                                                     
H15    -108.5°  -61.3°  109.3°  159.1°  -78.7°  122.4°  -80.6°  118.6°   99.4° -105.3°   70.6°   51.8° -143.5° -141.3°   H15                                              
H16     100.4°  -92.8°  -99.9°  -47.0°   69.6°  -87.2°   74.3°  -89.7°  -93.2°   61.8° -115.6° -121.2°   32.8°   32.6° -148.2°   H16                                       
H17     -82.1°   82.6°   68.0°  131.7° -113.8°   93.1°  -98.4°   92.6°  100.7° -102.6°   82.0°   77.6° -128.4° -128.6°   41.4° -161.2°   H17                                
H18     125.4°  -70.3° -136.8°  -77.7°   36.8° -115.8°   58.0° -115.5°  -95.9°   68.2° -102.3°  -94.2°   61.5°   59.8° -112.1°   37.1° -150.6°   H18                         
E19      89.8° -100.5°  -81.8°  -38.4°   84.8°  -75.9°   81.2°  -79.7°  -95.2°   59.2° -122.4° -135.1°   22.1°   23.6° -161.6°  -18.2°  145.4°  -55.0°   E19                  
E20     -88.2°   81.7°   98.0°  139.2°  -96.4°  102.2° -101.0°   98.2°   82.3° -123.4°   55.1°   43.0° -160.3° -159.0°   20.5°  161.4°  -35.8°  125.2°  177.5°   E20           
H21      64.7°  115.3°  -38.1°  -44.6°  121.9°  -53.3°  100.8°  -59.4°  -96.5°   67.5°  122.8°  147.3°  -41.8°  -44.4°  143.4°  -62.2°  103.2°  -98.7°  -44.0°  136.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2h6hb1 :   (PRO528)  (PRO919)   [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Human (Homo sapiens) [TaxId: 9606]
 d1jcqb_ :    (PRO28)  (PRO419)   [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Human (Homo sapiens) [TaxId: 9606]
 d2h6ib1 :   (PRO528)  (PRO919)   [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Human (Homo sapiens) [TaxId: 9606]
 d3kslb_ :    (VAL43)  (PRO419)   [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1ft1b_ :    (PRO28)  (PRO419)   [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4gtmb_ :    (THR42)  (LEU416)   [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2h6fb1 :   (PRO528)  (PRO919)   [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.102