Protein Concepts Dictionary

Tableau information

Concept source:  d2g86a_  amino acid (a.a.) range (HIS80)(PRO308)

nSSEs in this Concept: 21

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHEEHEHEEEHEEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (HIS80)   (ASP83) H1
	   (ASP83)   (SER93) H2
	  (PHE104)  (LYS110) H3
	  (ASP111)  (HIS131) H4
	  (ASP132)  (LYS138) H5
	  (VAL145)  (ARG151) H6
	  (ARG151)  (SER156) E7
	  (ASP159)  (LEU164) E8
	  (LEU164)  (THR173) H9
	  (LEU180)  (ALA184) E10
	  (ASN186)  (THR192) H11
	  (LEU201)  (ASN207) E12
	  (LYS210)  (TYR216) E13
	  (ARG218)  (ASP221) E14
	  (ASP221)  (CYS244) H15
	  (GLU247)  (GLY256) E16
	  (GLY256)  (PHE261) E17
	  (LEU265)  (SER273) H18
	  (THR281)  (ASN285) E19
	  (ASP298)  (ASN303) E20
	  (ASN303)  (PRO308) E21

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                 
H2      -48.9°   H2                                                                                                                                          
H3      -89.5°  105.8°   H3                                                                                                                                   
H4      133.2°   93.9° -132.7°   H4                                                                                                                            
H5       60.0°   99.8° -105.5° -113.0°   H5                                                                                                                     
H6      113.7°  106.9° -147.2°   42.7°  -70.7°   H6                                                                                                              
E7      -48.1°   45.5° -137.3°   86.4°  -62.0°  -71.2°   E7                                                                                                       
E8      117.3°  153.7°  -48.2° -107.4°   86.2°   99.3°  148.2°   E8                                                                                                
H9      132.1°  154.0° -100.2°  -68.1°   72.3°   47.2°  112.3°  -52.1°   H9                                                                                         
E10     -44.5°   35.4°   70.8°  122.1°  104.0°  141.9°   73.3° -118.3° -169.3°   E10                                                                                 
H11     -53.9°   59.7°  -46.8°  137.6°  104.4°  165.4°   94.3°  -94.0° -145.8°   24.3°   H11                                                                          
E12     146.0° -156.0°   94.5°  -62.6°  -86.5°  -53.2° -123.0°   49.0°  -14.4°  163.6°  141.2°   E12                                                                   
E13     -12.9°   40.1°  -85.0°  131.5°   72.8°  122.4°   52.5° -121.0°  144.9°  -31.8°  -44.0°  158.3°   E13                                                            
E14      78.1°   82.5°  -24.0° -131.0°  115.8° -168.0°  120.6°  -72.0° -123.4°   48.5°   26.3° -115.7°  -69.6°   E14                                                     
H15    -143.5° -111.7°  127.0°  -18.5° -103.5°  -34.5°  -95.6°  -91.4°  -49.7°  140.4°  151.9°  -44.5°  146.4°  135.3°   H15                                              
E16       4.3°   49.1°  -85.5°  136.3°   62.7°  118.0°   52.0° -115.2°  134.5°  -41.4°  -49.7°  147.8°  -10.5°  -73.8°  147.5°   E16                                       
E17      74.3°   78.0°  -28.2° -131.8°  115.2° -172.0°  116.0°  -76.3° -127.9°   43.9°   21.9° -120.3°   65.5°   -4.6° -138.0°  -70.0°   E17                                
H18    -146.1°  164.7°   75.9°  -74.9°  -94.2°  -72.1° -141.2°  -32.9°  -29.1°  145.2°  122.4°  -18.8° -153.2°   96.9°   58.5° -145.4° -101.5°   H18                         
E19    -113.9°   68.6°  130.9°  -26.5° -123.6°  -61.9°  -74.7° -128.7°  -94.6°   95.7°  113.6°  -88.5°  108.2°  116.7°  -45.0°  115.6°  115.5°   98.5°   E19                  
E20      83.9° -124.4°  -36.5° -141.0°   71.5°  119.9° -124.8°   33.7°   77.6°  -91.7°  -69.4°   79.6°  -87.4°  -56.9°  123.9°  -81.6°  -59.7°   66.1°  160.4°   E20           
E21      27.4°  -57.9°  -62.9°  151.7°   76.2°  140.4°   74.3°   99.7°  138.3°  -32.6°  -29.2°  145.6°  -22.6°  -51.1° -168.9°  -23.1°  -47.6°  132.6° -125.8°   66.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1njca_ :    (HIS80)  (TYR307)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d3ik1a_ :    (ILE71)  (TYR307)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d1bo8a_ :    (HIS80)  (TYR307)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d2g86a_ :    (HIS80)  (PRO308)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d1tsva_ :    (ARG72)  (PRO308)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d2g8aa_ :    (ASP83)  (TYR307)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d2g89a_ :    (ARG72)  (TYR307)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d1jmfa_ :    (TRP82)  (PRO308)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d1bp6a_ :    (HIS80)  (PRO308)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.117