Protein Concepts Dictionary

Tableau information

Concept source:  d1g7xa_  amino acid (a.a.) range (LEU50)(GLY345)

nSSEs in this Concept: 21

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEHEHEHEHHHEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU50)   (ASN63) H1
	   (PRO77)   (LEU87) H2
	   (GLY89)   (LYS98) H3
	   (ARG99)  (GLN104) E4
	  (GLY107)  (THR123) H5
	  (LYS126)  (SER136) E6
	  (ASN142)  (GLY151) H7
	  (GLU154)  (ALA159) E8
	  (PHE170)  (GLN181) H9
	  (ASP184)  (HIS189) E10
	  (THR201)  (LYS215) H11
	  (LEU218)  (ALA224) E12
	  (TYR225)  (ARG230) H13
	  (GLY231)  (GLU238) H14
	  (GLU238)  (HIS247) H15
	  (LEU250)  (TYR256) E16
	  (TYR256)  (GLY261) H17
	  (VAL267)  (ALA275) E18
	  (SER277)  (ASN294) H19
	  (HIS301)  (ASN312) H20
	  (ASP313)  (GLY345) H21

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                 
H2      157.8°   H2                                                                                                                                          
H3      -46.2°  121.5°   H3                                                                                                                                   
E4      -82.7°  119.3° -107.5°   E4                                                                                                                            
H5       75.9°  -90.5°   31.1°  129.3°   H5                                                                                                                     
E6     -138.4°   53.1°  174.6°  -77.2°  143.5°   E6                                                                                                              
H7       45.5° -122.6°   -1.2°  106.3°  -32.1° -175.6°   H7                                                                                                       
E8      150.0°   30.4°  149.1° -102.0°  119.2°  -25.6°  150.2°   E8                                                                                                
H9      -44.7° -125.3°   -5.8°  101.8°  -35.0°  176.1°   -4.8°  154.0°   H9                                                                                         
E10    -105.1°   85.8° -151.3°  -59.3°  171.2°  -33.7°  150.4°  -55.9°  148.7°   E10                                                                                 
H11     -59.8° -109.7°   13.7°  111.8°   20.1°  161.8°  -14.4°  139.2°  -15.8° -164.4°   H11                                                                          
E12     -94.6°  101.0° -137.3°  -39.7° -167.4°  -48.1°  136.2°  -73.0°  132.9°  -20.1°  147.4°   E12                                                                   
H13     147.5°   29.1°  144.9° -106.8° -115.9°   29.9° -146.1°    5.0° -150.2°   58.7° -136.0°   76.5°   H13                                                            
H14    -100.5°  -70.8°   54.3°  123.3°  -27.0°  121.0°  -55.0°  101.3°  -56.3°  154.3°   40.8°  155.4°   99.6°   H14                                                     
H15      65.2°  -96.4°   29.8°  137.3°   19.5°  145.3°  -30.9°  120.0°  -35.5° -153.4°  -27.5° -158.1° -115.5°  -44.9°   H15                                              
E16     -88.4°  108.9° -128.8°  -31.2°  158.0°  -56.6°  127.7°  -81.9°  124.1°  -29.5°  138.1°   -9.5°  -85.6°  152.1° -153.5°   E16                                       
H17    -100.8°   89.0° -147.0°  -60.3°  168.3°  -37.7°  146.3°  -58.8° -144.9°    4.9° -160.5°   20.6°   61.2°  158.7° -149.3°  -29.6°   H17                                
E18      91.4°  -68.0°   59.3°  164.7°  -35.5°  115.6°  -60.5°   90.1°  -64.8°  136.0°  -53.5°  155.4°   85.7°  -43.9°  -29.9°  163.3°  134.9°   E18                         
H19     -80.5°  121.3°  -93.9°  -17.9°  112.0°  -90.2°   92.8° -112.7°   88.1°  -76.7°   95.9°  -57.5°  117.7°  106.0°  122.8°  -49.1°  -78.1°  147.1°   H19                  
H20     107.3°   59.2° -118.5°  124.6° -105.6°   59.1° -119.3°   45.7° -123.9°   65.6° -120.3°   84.9°   41.6° -108.6°  -92.8°   93.5°   64.3°  -70.6°  142.3°   H20           
H21    -152.6°  -46.8°  123.1°   77.8° -102.0°  -54.6° -123.3°  -54.7°  121.5°   81.2°  110.5°   82.5°  -58.3°   75.1°  119.3°   84.9°   86.1° -102.5°   75.1°  -99.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qisa_ :    (LEU50)  (ARG327)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1g4va_ :    (LEU50)  (GLY345)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1b4xa_ :    (THR51)  (GLY345)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d2d66a_ :    (LEU50)  (GLY345)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1aria_ :    (LEU50)  (ARG327)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d2d61a_ :    (LEU50)  (ASN312)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1g4xa_ :    (LEU50)  (GLY345)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1g7wa_ :    (LEU50)  (ASN312)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1ahea_ :    (LEU50)  (GLY345)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d3ii0a_ :    (LEU51)  (LYS346)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2d5ya_ :    (LEU50)  (ASN312)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d3fsla_ :    (LEU50)  (GLU344)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aromatic aminoacid aminotransferase, AroAT |Escherichia coli K-12 [TaxId: 83333]
 d1ajsa_ :    (LEU50)  (LYS345)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Pig (Sus scrofa), cytosolic form [TaxId: 9823]
 d1arha_ :    (LEU50)  (ASN312)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1ix6a_ :    (LEU50)  (GLY345)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1czca_ :    (LEU50)  (ASN312)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d2d64a_ :    (LEU50)  (ASN312)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1yooa_ :    (LEU50)  (GLY345)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1g7xa_ :    (LEU50)  (GLY345)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1ix8a_ :    (LEU50)  (ASN312)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67