Protein Concepts Dictionary

Tableau information

Concept source:  d1hm5a_  amino acid (a.a.) range (PRO7)(ARG307)

nSSEs in this Concept: 21

String of secondary struct.elems. (SSEs) defining this concept: HHHEEHHHEHEHEHHEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO7)   (HIS19) H1
	   (LEU25)   (THR31) H2
	   (GLU34)   (PHE39) H3
	   (PHE39)   (THR45) E4
	   (GLY48)   (TYR54) E5
	   (THR60)   (GLY75) H6
	   (GLY75)   (GLY86) H7
	  (MET118)  (GLY138) H8
	  (THR149)  (GLY155) E9
	  (ILE156)  (LEU170) H10
	  (ARG179)  (SER184) E11
	  (GLY188)  (LEU198) H12
	  (SER203)  (SER209) E13
	  (GLN215)  (LYS233) H14
	  (ASP234)  (LYS240) H15
	  (HIS241)  (SER246) E16
	  (ASN248)  (GLY256) H17
	  (MET262)  (TRP266) E18
	  (SER274)  (GLY280) H19
	  (GLY280)  (HIS286) H20
	  (PHE289)  (ARG307) H21

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                 
H2       93.9°   H2                                                                                                                                          
H3     -154.1°  111.2°   H3                                                                                                                                   
E4     -128.5°  -80.2°  -53.9°   E4                                                                                                                            
E5       62.6°  110.7°  111.5°  165.1°   E5                                                                                                                     
H6     -157.3° -108.8°    6.8°  -58.5°  107.3°   H6                                                                                                              
H7     -127.5°  -99.1°  -44.3°  -18.9°  148.2°   50.4°   H7                                                                                                       
H8      -64.1° -100.0°  103.6°  -66.7°  119.1°  110.4°   63.6°   H8                                                                                                
E9      -96.9°  113.0°   79.7°  132.7°  -34.4°   74.5°  123.0°  143.3°   E9                                                                                         
H10      59.9°  -47.3° -134.4°  -80.9°  113.9° -137.7°  -94.2°  -56.7° -142.1°   H10                                                                                 
E11     -93.8°  130.5°   75.2°  128.5°  -36.6°   71.5°  113.9°  127.0°  -17.6° -150.4°   E11                                                                          
H12      93.8°  -64.2°  -91.5°  -37.7°  156.0°  -96.2°  -49.9°   45.0° -169.2°   44.4° -162.8°   H12                                                                   
E13    -106.0°   95.5°   78.9°  125.5°  -45.6°   72.5°  122.8° -162.0°  -18.9°  133.3°  -35.8°  152.9°   E13                                                            
H14      94.2°  -94.7°  -77.8°  -36.6°  145.8°  -84.3°  -34.4°   30.4° -149.2°   67.3°  133.2°  -30.6° -156.6°   H14                                                     
H15      74.8°   32.4° -130.3°  112.6°  -78.7° -125.0° -131.5° -113.1°  -89.2°   57.5° -105.1°   91.8°  -76.1°  121.5°   H15                                              
E16    -102.4°   81.0°   88.4°  126.5°  -49.2°   81.6°  129.7° -166.5°  -32.1°  118.6°  -49.7°  142.5°  -15.2° -163.0°  -61.1°   E16                                       
H17      73.9° -113.5°  -89.6°  -62.5°  118.6°   96.3°  -54.2°   16.4°  133.1°  -72.7°  115.6°  -52.3°  151.0°  -27.2°  129.5°  165.1°   H17                                
E18     -86.2°   76.0°  105.6°  139.2°  -41.4°   98.9°  146.3° -149.9°  -39.5°  105.2°  -55.9°  140.1°  -28.8°  170.7°   49.7°  -17.3°  158.2°   E18                         
H19    -111.1° -102.7°  -58.3°  -27.4°  146.1°  -64.9°  -16.4°   47.4°  132.6°  -85.2°  119.4°  -43.3°  137.0°  -19.6° -133.9°  145.8°  -38.0°  162.7°   H19                  
H20      71.8°  -56.3° -116.4°  -62.5°  131.8° -120.9°  -74.2°  -43.8° -162.4°  -20.3° -165.2°   24.9°  150.6°   47.5°   75.1°  135.5°  -57.9°  124.4°  -64.9°   H20           
H21      87.9°   75.6° -104.1°  137.6°  -42.6°  -97.4° -144.6°  151.5°  -39.2°  106.0°  -55.9°  139.9°  -27.8° -170.3°  -50.0°  -15.8°  159.8°    1.7° -161.0°  124.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1n8ta_ :     (PRO7)  (ARG307)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1hm5a_ :     (PRO7)  (ARG307)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d3hjba_ :    (THR10)  (THR308)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |automated matches |Vibrio cholerae [TaxId: 666]
 d1iata_ :     (PRO7)  (PHE306)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Human (Homo sapiens) [TaxId: 9606]
 d1iria_ :     (ASP7)  (ARG308)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Human (Homo sapiens) [TaxId: 9606]
 d1jlha_ :     (PRO7)  (ARG307)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.80