Protein Concepts Dictionary

Tableau information

Concept source:  d1gc9a_  amino acid (a.a.) range (ARG85)(LEU344)

nSSEs in this Concept: 21

String of secondary struct.elems. (SSEs) defining this concept: HEHHEEEEHEHEHHEHEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG85)   (ASP98) H1
	  (ASN102)  (VAL108) E2
	  (PRO110)  (SER116) H3
	  (LYS119)  (ARG124) H4
	  (ASP127)  (GLU133) E5
	  (ARG144)  (GLU148) E6
	  (GLU150)  (THR154) E7
	  (GLU155)  (LYS159) E8
	  (LYS159)  (ARG176) H9
	  (LYS178)  (ASP184) E10
	  (LEU189)  (PRO207) H11
	  (ALA210)  (TYR215) E12
	  (TYR215)  (ARG225) H13
	  (SER226)  (ASP231) H14
	  (ASP231)  (THR235) E15
	  (ASN237)  (GLY252) H16
	  (LEU256)  (ARG264) E17
	  (THR266)  (PRO271) E18
	  (PRO287)  (GLY303) H19
	  (VAL305)  (PRO323) H20
	  (GLY332)  (LEU344) H21

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                 
E2      109.8°   E2                                                                                                                                          
H3     -130.5°  -95.2°   H3                                                                                                                                   
H4       38.1° -130.1°  134.4°   H4                                                                                                                            
E5      -81.1°  162.7°   67.8°   66.6°   E5                                                                                                                     
E6     -143.7°   86.2°   13.4° -143.5°  -77.5°   E6                                                                                                              
E7       41.4°  -87.6° -171.7°   42.6°  108.8° -173.4°   E7                                                                                                       
E8       25.9° -103.6° -154.6°   28.4°   91.9°  167.9°  -18.5°   E8                                                                                                
H9       91.3°  -35.1° -128.2°  -97.2°  161.8° -116.8°  -56.7°  -74.8°   H9                                                                                         
E10    -112.3°  114.9°   21.5° -113.6°  -47.8°   34.1° -152.3° -133.9°  149.2°   E10                                                                                 
H11      53.1°  -79.6° -174.8°   50.9°  117.4° -162.2°   11.8°   29.9°  -46.6°  163.6°   H11                                                                          
E12    -131.6°   96.3°    2.2° -133.5°  -66.8°   12.9° -173.0° -155.0°  128.7°  -21.3°  175.0°   E12                                                                   
H13     114.4°   31.3° -109.0° -113.3° -155.7°  -96.3°   77.3°   95.8°   23.4° -130.3°   66.0°  109.0°   H13                                                            
H14      40.5° -132.3°  132.3°   -2.8°   64.6° -141.0°   44.9°   31.1°  -99.0° -111.8°   52.9° -131.4° -114.3°   H14                                                     
E15     -94.9°  144.4°   49.4°  -85.0°  -18.4°   59.6° -126.9°  109.3°  172.4°  -29.6°  135.8°  -48.5° -149.8°   83.0°   E15                                              
H16     118.2°   25.3°  102.8° -120.5° -157.5°  -90.4°   83.1° -101.5°   27.2°  124.2°  -72.2°  102.9°   -7.5° -121.6° -146.9°   H16                                       
E17     -43.8°  153.3° -101.9°   34.8°  -38.2° -113.7°   72.8°   54.8°  129.5°  -80.5°   83.2° -101.6°  148.0°   33.9°  -54.7°  155.0°   E17                                
E18    -141.3°  -33.1°   66.3° -157.7°  132.2°   55.0° -118.5° -135.9°  -62.0°   87.6° -108.5°   66.7°  -44.4° -158.5°  114.6°  -37.3°  167.6°   E18                         
H19      13.3°  123.1° -122.9°   31.9°  -67.9°  136.3°   49.7°   31.7°  103.2° -102.8°   61.4° -123.5°  125.9°   33.6°  -82.5°  130.4°  -30.4°  153.8°   H19                  
H20    -155.2°  -45.6°   61.3° -154.3°  122.1°  -48.5° -125.0° -143.5°  -69.0°   82.5° -113.8°   61.2°  -47.8°  153.5°  106.1°  -42.0°  160.3°  -14.4° -168.1°   H20           
H21     -26.6°   84.0° -143.0°  -54.5° -107.6°  151.1°  -29.5°  -27.9°   65.9° -132.1°  -37.9°  145.0°   89.2°  -57.3° -120.8°   92.1°  -70.0°  116.7°  -39.7°  129.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2y3za_ :    (ARG85)  (LEU349)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thermus thermophilus [TaxId: 274]
 d2y42b_ :    (ARG85)  (GLU350)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thermus thermophilus [TaxId: 274]
 d1hexa_ :    (ARG85)  (ALA345)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Thermus thermophilus [TaxId: 274]
 d1gc9a_ :    (ARG85)  (LEU344)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Thermus thermophilus [TaxId: 274]
 d1idma_ :    (ARG83)  (ALA343)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Thermus thermophilus [TaxId: 274]
 d1gc8a_ :  (THR1088) (ALA1345)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Thermus thermophilus [TaxId: 274]
 d1wala_ :    (SER85)  (ALA345)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Thermus thermophilus [TaxId: 274]
 d1g2ua_ :    (ARG85)  (LEU344)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Thermus thermophilus [TaxId: 274]
 d1osja_ :    (ARG85)  (LEU344)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Thermus thermophilus [TaxId: 274]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.77