Protein Concepts Dictionary

Tableau information

Concept source:  d4icsa_  amino acid (a.a.) range (ASN5)(ASP259)

nSSEs in this Concept: 21

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHHEHHHEHHHEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASN5)   (ASN23) H1
	   (HIS28)   (ILE34) E2
	   (ARG39)   (GLY53) H3
	   (HIS55)   (TRP61) E4
	   (ASP64)   (ALA74) H5
	   (PRO75)   (ASN81) H6
	   (GLU84)   (LYS97) H7
	   (SER99)  (SER105) E8
	  (ASP107)  (ASN112) H9
	  (ASP115)  (LYS131) H10
	  (LYS131)  (ASN140) H11
	  (VAL142)  (LEU152) E12
	  (LEU152)  (VAL158) H13
	  (SER164)  (ARG181) H14
	  (VAL188)  (GLN209) H15
	  (ALA212)  (ALA217) E16
	  (ASP221)  (GLY225) E17
	  (ASN229)  (ALA235) E18
	  (ALA235)  (ASN239) E19
	  (GLU243)  (ASN248) E20
	  (GLU253)  (ASP259) E21

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                 
E2      130.8°   E2                                                                                                                                          
H3      -48.9°  174.5°   H3                                                                                                                                   
E4      116.3°  -15.4°  165.2°   E4                                                                                                                            
H5       69.0°  -68.5° -113.9°   53.4°   H5                                                                                                                     
H6       59.1° -142.5°   32.1° -145.6° -126.5°   H6                                                                                                              
H7      -73.4° -139.0°   36.3° -148.5° -141.8°  -15.5°   H7                                                                                                       
E8      143.3°  -14.6°  162.5°  -29.9°  -83.1° -133.9°  126.8°   E8                                                                                                
H9      -80.0°   62.8° -120.7°   49.0°  -13.6° -138.7° -153.3°   76.8°   H9                                                                                         
H10     -50.9° -176.1°   -2.9°  167.2°  114.8°  -34.1°  -37.1° -162.1°  120.9°   H10                                                                                 
H11      88.0° -111.4°   63.5° -120.3° -141.5°  -33.4°   28.3° -100.9° -154.0°  -64.8°   H11                                                                          
E12     159.7°  -29.0°  151.4°  -43.4°  -92.6° -135.3°  123.2°  -18.2°   83.2°  149.3° -102.7°   E12                                                                   
H13     100.6°   59.1°  115.5°   62.3°   93.5°  -84.3°  -86.9°   56.6°   99.6° -117.9°  -59.9°  -71.2°   H13                                                            
H14      40.6°  146.5°  -28.7°  141.2°  108.4°  -18.5°  -33.4°  144.5°  120.3°  -31.5°   49.3°  151.9°   88.6°   H14                                                     
H15     -40.5°   93.4°  -84.5°   81.4°  -54.0°  -77.2°  -92.3°  103.6°  -67.5°  -87.2°  -88.3°  121.6°   65.9°  -62.7°   H15                                              
E16    -155.3°  -25.5°  153.2°  -40.8°  -92.7°  131.0°  120.7°  -12.0°  -84.8°  151.9°   97.7°   -8.4°   62.8°  145.7°  115.3°   E16                                       
E17      41.0°  161.0°  -23.5°  147.3°   94.1°  -54.3°  -59.8°  170.8°   98.6°  -22.8°  -86.8°  154.8° -132.5°  -44.7°  -81.5°  162.6°   E17                                
E18     155.3°  -72.7°  108.5°  -86.2° -124.7°  108.3°   92.8°  -61.2°  111.5°  106.1°   88.8°  -43.8°  -98.8° -125.5°  163.6°   49.3°  114.4°   E18                         
E19     -50.9°  133.7°  -51.3°  122.9°   74.5°   82.5°  -87.1°  143.3°   74.8°   50.1°  114.8° -134.0°  151.4°  -71.4°  -86.4° -141.9°   28.2° -109.4°   E19                  
E20    -125.8°    7.6°  167.5°  -14.8°  -67.7° -136.4° -135.2°   17.8°  -63.8° -170.1° -107.1°   34.7°   52.3°  138.9°   87.0°  -29.7°  161.8°  -78.4°  137.4°   E20           
E21     -38.1°   95.0°  -85.9°   79.7°   31.6°  -95.0° -110.2°  109.2°   44.0°  -87.5° -116.5°  122.3°   93.2°  -76.8°  -31.5° -120.5°   71.2°  154.6°   62.9°   91.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4icqa_ :     (LYS7)  (PHE260)   [view usage] : e.60.1.0 |Thermophilic metalloprotease-like |Thermophilic metalloprotease-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
 d1zjca1 :     (ASN3)  (ASP259)   [view usage] : e.60.1.1 |Thermophilic metalloprotease-like |Thermophilic metalloprotease-like |Thermophilic metalloprotease (M29) |Aminopeptidase S, AMPS |Staphylococcus aureus [TaxId: 1280]
 d4icra_ :     (PHE6)  (ALA257)   [view usage] : e.60.1.0 |Thermophilic metalloprotease-like |Thermophilic metalloprotease-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
 d4icsa_ :     (ASN5)  (ASP259)   [view usage] : e.60.1.0 |Thermophilic metalloprotease-like |Thermophilic metalloprotease-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  e.60