Protein Concepts Dictionary

Tableau information

Concept source:  d4gl1x_  amino acid (a.a.) range (GLY8)(SER259)

nSSEs in this Concept: 21

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEEEEHEHEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLY8)   (PHE20) H1
	   (GLU26)   (PRO30) E2
	   (PRO46)   (TYR51) E3
	   (GLN53)   (GLY63) E4
	   (ALA65)   (ASP71) E5
	   (LYS76)   (GLY82) E6
	   (GLY86)   (GLN92) E7
	   (GLN92)   (GLY98) E8
	  (GLU106)  (ASP110) E9
	  (LYS111)  (ALA115) E10
	  (ALA115)  (LYS127) E11
	  (PHE131)  (GLN137) H12
	  (GLY140)  (VAL150) E13
	  (LYS154)  (LYS168) H14
	  (GLY171)  (ASP175) E15
	  (TYR191)  (PRO195) E16
	  (THR208)  (LEU212) E17
	  (LYS213)  (SER219) E18
	  (SER219)  (LEU229) H19
	  (PRO247)  (ASN253) E20
	  (ASN253)  (SER259) E21

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                 
E2      150.6°   E2                                                                                                                                          
E3      118.8°  -57.1°   E3                                                                                                                                   
E4      111.5°  -96.8°  -79.6°   E4                                                                                                                            
E5       55.4°   95.7°   86.0°  151.6°   E5                                                                                                                     
E6      -70.8°  118.7° -168.1°  -90.3° -105.9°   E6                                                                                                              
E7      146.5°  -50.5°  -37.7°  -52.3°  122.4°  130.4°   E7                                                                                                       
E8     -128.2°  -78.1° -101.8°  -43.7°  164.8°   66.3°   64.1°   E8                                                                                                
E9      -90.8°  -91.9° -148.5° -100.8°  104.2°   27.6° -119.3°  -62.5°   E9                                                                                         
E10     123.1°   42.6°  -19.7°  -95.3°   77.1°  161.0°  -45.9° -106.1°  133.4°   E10                                                                                 
E11      25.8°  129.0°   95.8°  122.0°  -35.3°  -94.9°  130.8°  152.9°  109.8°   97.5°   E11                                                                          
H12     -73.0°  123.9° -155.5°  -76.0°  116.9°   15.0° -120.6°  -58.2°   38.8° -163.8°   98.7°   H12                                                                   
E13    -160.5°   36.7°  -80.5°  -73.1°  128.5°   90.5°  -51.6°  -42.2°  -69.7°   73.8°  163.8°  -90.5°   E13                                                            
H14      97.7°  -97.4°   49.0°  -43.3°  109.7° -125.5°   49.6°  -85.0° -143.6°  -68.7°   91.3° -110.8°  -97.9°   H14                                                     
E15     -92.1°   59.1°  -83.1°  155.5°  -42.0°  104.4°  104.0°  125.3°   85.0°   64.7°  -76.9°  119.3°   87.0°  129.6°   E15                                              
E16     -52.4° -147.6°   93.5°   61.8°  -95.1°  -87.2°   98.5°   97.4°  114.8° -111.5°  -60.8°  -76.8°  134.9°   50.2° -137.0°   E16                                       
E17    -144.8°   28.9°  -85.3°  -97.3°  105.9°   89.8°  -68.0°  -62.3°  -63.3°   71.5°  140.4°  -95.8°  -24.1° -117.4°   63.9°  158.8°   E17                                
E18     149.2°  -36.7°  -30.6°  -69.3°  108.5°  139.0°  -17.0°  -74.9° -119.8°   31.6°  126.1° -133.2°  -50.3°  -60.8°   87.1° -111.0°   59.8°   E18                         
H19      72.2° -122.7°   69.0°  -53.5°   98.5° -110.0°   75.6°  -96.5° -136.2°   87.8°   70.7°  -97.4° -121.5°   26.1°  134.0°  -25.2° -143.1°   86.4°   H19                  
E20     -29.1° -139.6°  145.9°  116.9°  -65.4°  -45.2°  169.0° -110.4°  -61.8°  142.5°   50.1°   52.4° -131.5°  122.2°  -86.9°   72.3° -119.0°  173.6°   96.2°   E20           
E21     110.6°  -41.5°  -79.1° -137.9°   60.9°  104.9°  -90.2° -107.3°  -80.1°   59.5°   96.0°  118.6°  -67.8°  128.1°   19.2°  155.1°  -45.2°   74.0°  143.4° -100.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1g0ea_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d2fnka_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d2aw1a_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d3u47a_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d2hfwa_ :     (ALA8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3oika_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d2fnma_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d4fika_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d3u45x_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d4l5ua_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1mooa_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d4gl1x_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d3kiga_ :     (GLY8)  (SER258)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d4qefa_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d3uyna_ :     (ALA8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3knea_ :     (GLY8)  (SER258)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3mdza_ :    (GLY10)  (VAL244)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3m2ya_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d4pq7a_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1zh9a_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d1lg5a_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]
 d3ryvb_ :     (GLY8)  (SER259)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.74