Protein Concepts Dictionary

Tableau information

Concept source:  d3g22b_  amino acid (a.a.) range (ARG14)(ILE222)

nSSEs in this Concept: 21

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHEHEEHHHEHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG14)   (ASP20) E1
	   (ASN23)   (VAL34) H2
	   (ASP39)   (TYR45) E3
	   (TYR45)   (GLU51) H4
	   (ILE55)   (LYS61) H5
	   (ARG66)   (PHE71) E6
	   (PRO77)   (GLY91) H7
	   (ASP93)   (HIS98) E8
	  (ALA103)  (MET116) H9
	  (ARG118)  (THR124) E10
	  (THR124)  (HIS128) E11
	  (HIS128)  (PHE134) H12
	  (PHE134)  (ALA139) H13
	  (ALA139)  (GLY150) H14
	  (ASN153)  (PRO157) E15
	  (PRO161)  (ILE171) H16
	  (PHE176)  (GLY181) E17
	  (GLY181)  (GLY186) H18
	  (ASP188)  (ARG194) H19
	  (ASP197)  (ARG203) E20
	  (PRO211)  (ILE222) H21

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                 
H2      164.3°   H2                                                                                                                                          
E3      -30.5°  158.9°   E3                                                                                                                                   
H4       45.6° -131.3°  -69.8°   H4                                                                                                                            
H5      138.2°  -29.6°  167.5°  103.7°   H5                                                                                                                     
E6      -47.2°  140.1°  -18.9°  -88.7°  163.2°   E6                                                                                                              
H7      102.9°  -65.8°  133.4°   69.5°  -36.2°  148.1°   H7                                                                                                       
E8      -74.6°  109.8°  -49.4° -118.8°  134.3°  -30.6°  151.9°   E8                                                                                                
H9      106.2°  -69.8°  130.9°   61.7°  -45.9°  149.4°  -29.8° -178.2°   H9                                                                                         
E10     -84.0°   94.7°  -66.8° -129.0°  113.2°  -50.2°  128.6°  -24.2° -157.0°   E10                                                                                 
E11     -59.1°  106.6°  -74.1°  -82.3°   94.8°  -75.4°   78.7°  -76.2°  105.7°  -61.3°   E11                                                                          
H12      99.2°  -95.3°   70.2°  116.0° -122.1°   59.5° -151.0°   53.4° -124.8°  -72.1° -129.4°   H12                                                                   
H13     153.3°  -40.8°  134.8°  118.3°  -57.5°  126.3°  -85.3°  109.7°  -68.8° -111.0° -147.4°  -66.9°   H13                                                            
H14     112.9°  -74.7°  117.1°   72.8°  -69.1°  126.3°  -70.3°  137.0°  -41.2° -152.8° -145.4°   83.9°  -45.6°   H14                                                     
E15     -70.9°   99.6°  -70.8° -106.8°  102.2°  -62.8°  100.5°  -51.8°  130.0°  -33.3°   28.4° -104.4° -133.3° -170.5°   E15                                              
H16     118.3°  -74.8°  107.6°   90.5°  -82.5°  109.1°  -94.6°  111.5°  -66.7°  127.2° -171.5°   58.1°   35.0°  -26.3°  160.1°   H16                                       
E17     -49.5°  118.0°  -59.6°   82.5°  109.8°  -60.0°   93.3°  -63.4°  118.4°  -52.9°  -15.4° -115.4° -156.6°  153.9°  -24.3°  166.9°   E17                                
H18     -64.8°  106.0°  -64.6°  102.3°  107.9°  -57.6°  103.3°  -49.7°  132.1°  -34.1°   27.5° -103.0° -138.7°  172.9°   -6.4°  160.7°   20.1°   H18                         
H19     121.0°  -74.6°   98.7° -109.6°  -93.4°   93.0° -115.7°   87.9°  -90.3°  102.2°  163.5°   35.4°   36.1°  -51.1°  135.4°  -24.9°  150.8°  136.0°   H19                  
E20     -30.3°  134.0°  -55.6°   53.0°  112.0°  -66.4°   81.8°  -83.7°   97.8°  -80.4°  -32.1°  125.3°  166.4°  125.0°  -53.8°  142.4°  -29.5°  -49.5°  151.3°   E20           
H21     149.9°  -41.2°  119.8° -155.3°  -70.6°  102.6° -106.7°   76.6° -102.3°   73.3°  121.6°  -55.5°  -37.9°  -82.9°   97.9°  -65.1°  122.2°  102.3°  -48.7°  151.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4o8rh_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d3g22b_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d3g1ab_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d1km0a_ :    (ARG14)  (ASP224)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d3g1va_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d1dvjb_ :    (ARG14)  (ASP224)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d4lc6b_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d3v1pb_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d3nqmb_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 145262]
 d3qmrb_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d4o8rf_ :    (ARG14)  (SER221)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d4lc8b_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d3nqgb_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 145262]
 d3nq6b_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 145262]
 d3lldb_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d3sj3b_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d3lv5b_ :    (ARG14)  (LYS223)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d1km0b_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d3lhyb_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d1km2a_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d3p61b_ :    (ARG14)  (ILE222)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
 d2zz4a_ :    (ARG14)  (LEU225)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Methanothermobacter thermautotrophicus [TaxId: 145262]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1