Tableau information
Concept source: d1drka_ amino acid (a.a.) range (ASP2)(LYS270)
nSSEs in this Concept: 21
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEEEHEHEHEHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP2) (VAL8) E1
(PRO14) (LEU30) H2
(ASN33) (ASP38) E3
(ASN42) (GLY57) H4
(LYS59) (ASN64) E5
(ASP67) (ASN82) H6
(PRO84) (ASP89) E7
(ASP89) (LYS94) E8
(VAL98) (ALA102) E9
(ASN105) (GLY121) H10
(VAL126) (THR132) E11
(THR135) (ALA151) H12
(LEU157) (ASP163) E13
(ARG166) (PRO181) H14
(GLN184) (GLN189) E15
(ASP191) (ALA204) H16
(VAL209) (ASP215) E17
(THR217) (GLY227) H18
(ALA230) (LEU236) E19
(LEU236) (GLY254) H20
(ALA259) (LYS270) E21
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 173.8° H2
E3 -16.9° 168.3° E3
H4 178.2° -7.7° 162.3° H4
E5 -17.0° 157.4° -33.9° 163.7° E5
H6 165.2° -20.2° 148.4° -14.3° -177.3° H6
E7 -33.8° 142.0° -49.8° 146.4° -18.7° 160.3° E7
E8 95.6° -87.2° 81.8° -84.6° 109.6° -71.3° 128.3° E8
E9 -44.8° 131.7° -59.8° 135.0° -30.9° 148.3° -12.3° -140.3° E9
H10 -38.2° 137.5° -54.2° 142.0° -22.6° 156.1° -4.5° -132.2° -9.5° H10
E11 139.0° -47.0° 122.4° -39.9° 155.4° 27.3° 158.7° -58.6° 151.4° 159.7° E11
H12 -49.7° 124.1° -64.3° 131.8° -36.6° -140.7° -38.7° 110.1° -45.9° -37.9° -162.4° H12
E13 141.4° -44.5° 128.6° 36.9° 150.4° 31.8° 140.9° -80.5° 130.6° 140.0° -22.4° 165.5° E13
H14 23.5° 150.9° 35.5° -158.3° -20.1° -158.7° -36.2° 94.5° -48.4° -39.0° 151.3° -29.3° 164.1° H14
E15 152.5° -32.8° 135.7° -26.9° 169.3° 12.7° 170.0° -60.6° 157.9° 167.1° -16.8° 147.6° -30.0° 153.7° E15
H16 -27.9° 152.3° -36.8° 150.8° -26.7° 155.2° -25.0° 117.8° -28.4° -28.4° 135.1° -60.9° 123.8° -45.8° 151.4° H16
E17 163.0° -21.5° 146.8° -16.9° 174.0° -4.6° 163.2° -67.8° 151.9° 158.8° -28.2° 138.2° -35.5° 154.2° -12.0° -159.3° E17
H18 48.6° -126.0° 65.4° -132.1° 31.6° -146.2° 18.8° 134.8° 19.5° 15.2° 166.6° -28.0° 144.3° -41.2° -158.9° 43.6° -147.3° H18
E19 160.8° -23.2° 145.0° -19.3° 171.5° -7.5° 165.2° 65.3° 154.3° 160.7° -28.5° 137.0° -37.6° 151.4° -11.8° -161.4° -2.9° -148.2° E19
H20 143.7° -38.5° 130.6° -36.8° 153.6° -26.0° 166.5° -48.8° 167.3° 164.9° -34.7° 127.8° -51.8° 133.7° -21.8° -164.2° -21.5° 150.3° 18.7° H20
E21 -48.3° 129.2° -61.7° 131.3° -36.4° 143.3° -19.1° -143.5° -8.3° -17.4° 143.1° -54.2° 122.6° -55.2° 151.0° -26.9° 147.4° -27.4° 150.2° 167.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3ksma_ : (PRO39) (LEU311) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Hahella chejuensis [TaxId: 349521]
d1ba2a_ : (ASP2) (LYS270) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |D-ribose-binding protein |Escherichia coli, strain k-12 [TaxId: 562]
d1drja_ : (ASP2) (LYS270) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |D-ribose-binding protein |Escherichia coli, strain k-12 [TaxId: 562]
d1apba_ : (LEU3) (THR290) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |L-arabinose-binding protein |Escherichia coli [TaxId: 562]
d2fn9a_ : (GLY2) (ARG280) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d4kzka_ : (VAL33) (GLY316) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1dbpa_ : (ASP2) (LYS270) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |D-ribose-binding protein |Escherichia coli, strain k-12 [TaxId: 562]
d2ioya_ : (LYS2) (LYS271) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Thermoanaerobacter tengcongensis [TaxId: 119072]
d2fn8a_ : (GLY2) (ARG280) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d2gx6a_ : (ASP2) (LYS270) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1urpa_ : (ASP2) (LYS270) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |D-ribose-binding protein |Escherichia coli, strain k-12 [TaxId: 562]
d1abea_ : (LEU3) (ARG291) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |L-arabinose-binding protein |Escherichia coli [TaxId: 562]
d1drka_ : (ASP2) (LYS270) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |D-ribose-binding protein |Escherichia coli, strain k-12 [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.93