Tableau information
Concept source: d2vomc_ amino acid (a.a.) range (PHE6)(ALA246)
nSSEs in this Concept: 21
String of secondary struct.elems. (SSEs) defining this concept: EHEHEEHEHHEHHHEHHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE6) (TRP12) E1
(ARG17) (ALA31) H2
(GLU38) (PRO44) E3
(ILE48) (LYS54) H4
(LYS58) (ALA63) E5
(GLN64) (LYS68) E6
(PRO80) (CYS86) H7
(THR89) (GLY94) E8
(HIS95) (GLY103) H9
(SER105) (GLY120) H10
(GLY122) (GLY128) E11
(LEU131) (GLY137) H12
(ILE138) (VAL154) H13
(ASP156) (VAL161) H14
(VAL161) (PRO166) E15
(PRO178) (VAL196) H16
(SER197) (GLN202) H17
(THR204) (GLY210) E18
(GLY214) (GLN223) H19
(ASP227) (GLY233) E20
(PHE240) (ALA246) H21
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 164.1° H2
E3 -12.9° -176.8° E3
H4 129.6° -34.8° 142.0° H4
E5 -47.4° 148.2° -35.1° 177.0° E5
E6 -91.6° -101.9° 80.2° -123.7° 58.3° E6
H7 101.6° -62.8° 114.0° -28.0° 149.0° -135.3° H7
E8 -74.6° 114.7° -67.7° 136.4° -44.5° -84.3° 140.4° E8
H9 41.8° -153.9° 29.4° 171.3° -5.7° -61.3° 143.4° -47.8° H9
H10 114.3° -57.3° 120.5° -40.3° 139.4° 92.5° -43.1° -170.7° 137.2° H10
E11 -78.9° 106.8° -75.0° 122.4° -58.1° -99.0° 125.3° -15.5° -60.5° -162.3° E11
H12 -140.2° 50.9° 132.0° -83.0° 99.6° 84.9° -108.6° 65.5° 105.1° -105.5° -62.6° H12
H13 94.2° -85.2° 93.9° -77.4° 102.6° 60.9° -75.5° 143.4° 101.2° -37.2° 158.9° 117.8° H13
H14 -51.2° 117.9° -60.5° 96.3° -81.3° -138.9° 76.7° -70.6° 77.8° 116.7° -61.3° -111.6° 128.8° H14
E15 -66.0° 115.1° -65.8° 118.3° -61.0° -112.7° 111.8° -30.0° -61.2° 154.8° -19.4° -78.9° 159.7° 42.0° E15
H16 111.8° -79.1° 102.4° -97.7° 84.3° 26.0° -112.4° 105.2° 87.1° -69.6° 117.9° 80.0° -46.1° 162.9° 135.1° H16
H17 -66.5° 98.7° -78.7° 70.0° -107.3° 156.2° 48.0° -97.9° -102.8° 88.6° -86.2° -117.7° 109.6° -28.8° -68.1° 155.6° H17
E18 -43.3° 129.0° -50.0° 110.9° -66.9° -125.0° 91.3° -58.5° -63.7° 129.7° -51.9° -109.7° 132.5° 14.8° -32.7° 150.5° -43.3° E18
H19 140.2° -55.4° 127.5° -87.7° 95.2° 50.9° -114.3° 87.2° 100.5° -84.0° 92.9° 40.9° -79.6° 151.6° 112.2° -39.3° -152.5° 144.7° H19
E20 -16.3° 148.9° -28.4° 116.6° -60.4° -107.9° 89.3° -77.5° -55.1° 111.9° -77.3° -139.5° 101.6° 36.3° -60.7° 127.1° 50.4° -31.7° 155.5° E20
H21 158.5° -37.4° 145.6° -71.3° 111.7° -69.4° -99.1° 92.9° 117.2° -77.7° 93.8° 32.5° -85.4° 141.3° 111.2° -53.9° 133.8° 142.1° -18.8° 170.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1htia_ : (PHE6) (PRO238) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Human (Homo sapiens) [TaxId: 9606]
d2vfda_ : (TYR5) (MET248) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d2vomc_ : (PHE6) (ALA246) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Human (Homo sapiens) [TaxId: 9606]
d2voma_ : (PHE6) (ALA246) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Human (Homo sapiens) [TaxId: 9606]
d2vffb_ : (TYR5) (MET248) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d2vomd_ : (PHE6) (ASN245) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Human (Homo sapiens) [TaxId: 9606]
d2vffa_ : (TYR5) (MET248) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d3uwva_ : (PRO4) (VAL242) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Staphylococcus aureus [TaxId: 282458]
d4iota_ : (PRO4) (ALA239) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Escherichia coli [TaxId: 316385]
d1btma_ : (PRO3) (HIS251) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Bacillus stearothermophilus [TaxId: 1422]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1