Tableau information
Concept source: d2vomb_ amino acid (a.a.) range (PHE6)(ASN245)
nSSEs in this Concept: 21
String of secondary struct.elems. (SSEs) defining this concept: EHEHEEHEHHEHHEHHEHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE6) (TRP12) E1
(GLN19) (ALA31) H2
(GLU38) (PRO44) E3
(ILE48) (LYS54) H4
(LYS58) (ALA63) E5
(GLN64) (LYS68) E6
(PRO80) (GLY87) H7
(THR89) (GLY94) E8
(HIS95) (GLY103) H9
(SER105) (GLY120) H10
(GLY122) (GLY128) E11
(LEU131) (GLY137) H12
(ILE138) (VAL154) H13
(LYS159) (TYR164) E14
(PRO178) (SER197) H15
(SER197) (SER203) H16
(THR204) (GLY210) E17
(GLY214) (GLN223) H18
(ASP227) (GLY233) E19
(GLY233) (PRO238) H20
(GLU239) (ASN245) H21
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 164.2° H2
E3 -12.7° -174.7° E3
H4 128.8° -35.5° 140.9° H4
E5 -48.9° 146.8° -36.7° -177.5° E5
E6 -92.2° -99.2° 80.7° -123.8° 56.8° E6
H7 103.0° -61.2° 115.0° -25.9° 151.7° -133.0° H7
E8 -74.6° 117.2° -68.1° 137.0° -44.8° -83.9° 142.9° E8
H9 40.8° -155.0° 28.6° 169.5° -8.2° -62.0° 143.6° -48.6° H9
H10 115.1° -54.0° 120.6° -40.2° 138.6° 91.9° -41.4° -169.6° 136.6° H10
E11 -78.2° 110.3° -75.0° 122.6° -58.8° -99.4° 126.9° -16.1° -61.1° -162.3° E11
H12 -136.9° 55.5° 129.7° -85.7° 96.8° 85.6° -109.7° 62.4° 104.1° -107.9° 59.9° H12
H13 95.2° -81.5° 93.9° -78.1° 100.8° 59.3° -75.1° 141.7° 100.1° -38.0° 157.8° 119.5° H13
E14 -72.2° 111.9° -72.7° 113.5° -67.3° -114.9° 112.0° -31.2° -67.2° 152.4° -16.9° -70.0° 166.4° E14
H15 111.7° -76.6° 102.1° -98.1° 82.5° 25.7° -109.9° 105.0° 87.3° -68.7° 118.8° 82.8° -43.9° 135.5° H15
H16 -64.5° 101.4° -77.1° 69.0° -109.3° 152.7° 48.3° -102.1° -102.0° 86.0° -90.0° -120.9° 106.5° -73.2° 150.4° H16
E17 -43.3° 131.5° -50.6° 109.6° -69.5° -126.0° 92.7° -59.6° -64.1° 129.7° -51.8° -106.8° 133.6° -37.6° 151.1° -44.7° E17
H18 141.3° -53.1° 128.7° -87.0° 94.9° 50.7° -110.8° 88.8° 102.7° -81.2° 95.4° 44.7° -76.3° 110.2° -38.9° -154.2° 147.2° H18
E19 -15.9° 150.5° -28.0° 116.1° -61.8° -108.1° 91.3° -77.4° -53.9° 113.0° -76.4° -136.0° 102.8° -66.3° 126.7° 49.2° -31.6° 156.4° E19
H20 -93.2° 71.0° -105.2° 35.6° -142.0° 135.1° 9.8° -140.3° -133.8° 46.1° 125.3° -118.1° -75.8° 109.2° -114.6° 40.7° 85.4° -120.0° -81.7° H20
H21 158.9° -36.5° 146.2° -71.8° 110.4° -69.2° -97.2° 93.0° 118.5° -76.7° 94.6° 35.9° -84.0° 105.9° -54.4° -135.9° 142.4° -18.6° 170.3° -106.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1mo0a_ : (PHE5) (ARG246) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1mo0b_ : (PHE5) (ALA245) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2vfeb_ : (TYR5) (MET248) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d2vomb_ : (PHE6) (ASN245) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Human (Homo sapiens) [TaxId: 9606]
d2jk2a_ : (PHE6) (ALA246) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Human (Homo sapiens) [TaxId: 9606]
d3pwaa_ : (TYR5) (SER246) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d2vfha_ : (TYR5) (SER246) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1ypia_ : (PHE5) (ASN245) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3pvfa_ : (TYR5) (MET248) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1r2ra_ : (PHE6) (ALA246) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d2jk2b_ : (PHE6) (ALA246) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Human (Homo sapiens) [TaxId: 9606]
d4owgb_ : (PHE6) (ALA246) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1