Protein Concepts Dictionary

Tableau information

Concept source:  d1va5a_  amino acid (a.a.) range (LEU6)(GLY282)

nSSEs in this Concept: 21

String of secondary struct.elems. (SSEs) defining this concept: EEEHHEHHEHEHHHHHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU6)   (GLN12) E1
	   (ARG20)   (GLY29) E2
	   (PRO31)   (LEU37) E3
	   (ASN47)   (ASN52) H4
	   (PRO54)   (TYR60) H5
	   (SER65)   (GLY71) E6
	   (LYS94)  (THR100) H7
	  (MET103)  (GLY112) H8
	  (GLY117)  (LEU123) E9
	  (GLY128)  (PRO138) H10
	  (PRO142)  (SER148) E11
	  (PHE150)  (GLU155) H12
	  (TRP157)  (SER169) H13
	  (ASN173)  (TRP178) H14
	  (PRO184)  (ASP190) H15
	  (ASP190)  (ILE195) H16
	  (ILE195)  (ASN202) H17
	  (ARG204)  (GLY210) E18
	  (ASN221)  (GLY246) H19
	  (ASN249)  (PRO255) E20
	  (TRP262)  (GLY282) H21

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                 
E2      160.4°   E2                                                                                                                                          
E3      -69.3°  128.4°   E3                                                                                                                                   
H4     -145.6°   53.6°   82.5°   H4                                                                                                                            
H5      120.1°  -40.3°  159.4°   93.1°   H5                                                                                                                     
E6      -42.8°  156.7°  -30.6° -103.9°  162.9°   E6                                                                                                              
H7      126.4°  -37.2°  163.5°  -81.1°  -22.4°  159.1°   H7                                                                                                       
H8      127.1°  -44.9°  145.0°  -68.6°  -46.5°  139.3°  -24.1°   H8                                                                                                
E9      -86.4°  112.5°  -19.0°   63.6°  151.3°  -44.5°  144.7°  127.4°   E9                                                                                         
H10      75.9°  -84.5°  138.5° -137.1°  -44.3°  118.6°  -57.2°  -75.3°  157.2°   H10                                                                                 
E11     -93.5°  105.6°  -26.0°   56.6°  144.9°  -51.3°  137.7°  121.5°   -7.1° -163.1°   E11                                                                          
H12      32.2° -144.7°   57.3°  137.7° -119.6°   46.7° -138.2° -153.5°   76.2°  -81.3°   82.8°   H12                                                                   
H13     -90.6°   96.7°   91.0°   70.0° -106.4°  -78.4°   84.5°   61.2°   82.3° -111.7°   81.1° -118.6°   H13                                                            
H14      85.9°  -74.6° -143.0° -128.0°  -35.0°  128.1°  -51.2°  -72.0° -159.1°   11.2° -161.7°  -87.1°  117.2°   H14                                                     
H15     160.9°    7.2° -129.8°  -51.0°   42.1° -154.9°   34.7°   38.8° -112.5°   86.3° -105.4° -151.8°   89.6°   77.0°   H15                                              
H16     104.0°  -58.3° -135.1° -109.9°   29.2°  139.5°  -51.6°  -75.6° -140.9°   36.6° -139.3°  -92.8° -133.9°  -25.9°  -63.1°   H16                                       
H17     124.0°  -38.1° -166.6°  -85.7°  -15.6°  161.9°   -6.9°  -31.0° -149.1°   51.9° -142.0°  132.1°   91.0°   45.1°  -36.9°  -44.7°   H17                                
E18     -98.1°  101.1°  -31.4°   51.2°  141.1°  -55.6°  132.2°  115.9°  -12.5° -168.4°   -5.6°  -88.4°   78.0° -164.4° -100.6° -139.7° -136.8°   E18                         
H19      87.7°  -74.7°  127.4° -126.0°  -42.0°  124.1°  -63.2°  -86.6°  139.9°   27.6° -141.5°   77.9° -137.4°  -20.3°  -79.4°  -16.4°  -56.3° -144.3°   H19                  
E20    -106.9°   92.7°  -42.1°   41.0°  133.0°  -64.1°  121.8°  105.2°  -23.0° -175.4°  -16.4°  -99.2°   72.2° -164.6°   91.4° -138.9°  126.7°  -10.8° -148.0°   E20           
H21      92.8°  -67.6°  153.7° -119.9°  -27.3°  135.6°  -40.9°  -61.3°  168.8°  -17.2°  168.2°  -97.3° -108.9°   10.8°   69.1°   28.9°   35.1°  167.1°   29.0°  160.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1va5a_ :     (LEU6)  (GLY282)   [view usage] : c.69.1.3 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Mycobacterial antigens |Antigen 85c |Mycobacterium tuberculosis [TaxId: 1773]
 d1sfrc_ :    (ARG20)  (LYS275)   [view usage] : c.69.1.3 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Mycobacterial antigens |Antigen 85a |Mycobacterium tuberculosis [TaxId: 1773]
 d3hrha_ :     (PRO7)  (GLY282)   [view usage] : c.69.1.3 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Mycobacterial antigens |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d1f0na_ :    (ARG20)  (GLY283)   [view usage] : c.69.1.3 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Mycobacterial antigens |Antigen 85b |Mycobacterium tuberculosis [TaxId: 1773]
 d4mqla_ :     (LEU6)  (GLY282)   [view usage] : c.69.1.3 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Mycobacterial antigens |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d4qeka_ :     (LEU6)  (GLY282)   [view usage] : c.69.1.3 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Mycobacterial antigens |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1dqza_ :     (LEU6)  (GLY282)   [view usage] : c.69.1.3 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Mycobacterial antigens |Antigen 85c |Mycobacterium tuberculosis [TaxId: 1773]
 d1dqya_ :     (LEU6)  (GLY282)   [view usage] : c.69.1.3 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Mycobacterial antigens |Antigen 85c |Mycobacterium tuberculosis [TaxId: 1773]
 d3hrhb_ :   (LEU506)  (GLY782)   [view usage] : c.69.1.3 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Mycobacterial antigens |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d1sfra_ :    (ARG20)  (LYS275)   [view usage] : c.69.1.3 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Mycobacterial antigens |Antigen 85a |Mycobacterium tuberculosis [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69