Protein Concepts Dictionary

Tableau information

Concept source:  d3lepa_  amino acid (a.a.) range (SER2)(SER290)

nSSEs in this Concept: 21

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHHEHEHEHEHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER2)    (ASN7) E1
	   (ALA10)   (LEU15) E2
	   (LEU15)   (LYS21) E3
	   (PRO23)   (GLY38) H4
	   (HIS41)   (VAL47) E5
	   (ASN50)   (VAL56) H6
	   (ALA57)   (GLN65) H7
	   (LEU72)   (LYS77) E8
	   (GLU84)  (LYS100) H9
	  (ASP105)  (ILE109) E10
	  (ILE137)  (GLY151) H11
	  (LYS154)  (ASN160) E12
	  (ASN162)  (LYS172) H13
	  (ALA180)  (GLU185) E14
	  (GLN192)  (GLY203) H15
	  (VAL205)  (SER210) E16
	  (ASP230)  (ASN241) H17
	  (THR243)  (ASN256) H18
	  (VAL258)  (LYS262) E19
	  (THR265)  (ASP277) H20
	  (SER281)  (SER290) H21

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                 
E2      144.3°   E2                                                                                                                                          
E3       84.3°  -70.8°   E3                                                                                                                                   
H4     -100.0°  106.6°  174.7°   H4                                                                                                                            
E5       60.8°  -91.2°  -23.7° -160.7°   E5                                                                                                                     
H6     -119.5°   95.8°  138.6°  -36.2° -151.2°   H6                                                                                                              
H7     -105.0°  110.4°  141.4°  -34.4° -144.4°  -14.7°   H7                                                                                                       
E8       56.1°  -88.6°  -43.2°  142.1°  -28.0° -175.6° -160.9°   E8                                                                                                
H9     -154.5°   59.8°  104.0°  -70.8°  126.3°  -40.7°  -53.8°  143.2°   H9                                                                                         
E10      63.4°  -80.9°  -48.9°  135.9°  -38.5°  170.2° -166.1°  -12.1°  139.4°   E10                                                                                 
H11    -106.9°  107.5°  119.5°  -56.4°  125.6°  -26.1°  -22.0°  151.5°  -47.9°  163.5°   H11                                                                          
E12      96.4°  -49.3°  -60.2°  122.0°  -64.8°  137.7°  150.2°  -46.1°  108.8°  -35.1°  156.6°   E12                                                                   
H13     -50.2°  164.2°  112.6°  -68.5°   96.1°  -71.3°  -56.8°  104.3° -104.9°  113.3°  -57.0°  146.3°   H13                                                            
E14     125.7°   18.9°  -56.2°  122.3°  -74.0°  114.6°  129.3°  -69.7°   77.4°  -62.5°  123.9°  -33.9°  168.5°   E14                                                     
H15      64.0° -151.7°  125.8°  -54.6°  111.2°  -56.3°  -41.6°  119.4°  -92.3°  127.4°  -45.5°  156.4°   15.6° -169.4°   H15                                              
E16    -128.0°   25.7°  -46.1°  130.6°  -68.4°  110.0°  123.1°  -74.1°   69.4°  -70.6°  110.8°  -50.2°  150.4°  -19.7°  152.5°   E16                                       
H17     117.5°  -97.5° -141.5°   33.4° -153.1°   -3.0°   13.3°  173.5°  -43.3°  168.2°  -27.6°  137.9°  -70.1° -116.4°  -54.8° -112.5°   H17                                
H18      35.4° -154.1°  119.8°  -64.6°   96.2°  -89.6°  -76.8°   86.5° -130.3°   89.5°  -88.2°  112.7°  -38.6°  146.4°  -43.8°  160.2°   87.0°   H18                         
E19    -121.7°   46.9°  -39.6°  135.3°  -62.9°  102.8°  111.9°  -80.1°   64.7°  -81.7°   93.6°  -72.0°  125.6°  -44.7°  128.5°  -25.0° -105.8°  155.2°   E19                  
H20      77.1°  114.7°  152.6°  -32.6°  132.4°  -68.7°  -64.2°  109.5° -101.3°  104.2°  -85.5°  101.8°  -69.9°  121.1°  -62.7°  139.2°   65.8°  -44.6°  160.3°   H20           
H21     -66.9°   81.3°   23.5° -161.8°  -13.6°  161.4° -157.9°  -19.8°  126.4°  -27.5°  137.8°  -51.1°  107.9°   63.1°  123.4°   61.1° -164.0° -101.1°   61.8° -129.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3lepa_ :     (SER2)  (SER290)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Aldose reductase (aldehyde reductase) |Human (Homo sapiens) [TaxId: 9606]
 d3lqla_ :     (SER3)  (SER291)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Aldose reductase (aldehyde reductase) |Human (Homo sapiens) [TaxId: 9606]
 d4famb_ :     (GLN6)  (GLY298)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Prostaglandin d2 11-ketoreductase (akr1c3) |Human (Homo sapiens) [TaxId: 9606]
 d3b3da_ :     (ALA7)  (ALA264)   [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d3wbwa_ :    (GLN11)  (GLN262)   [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Gluconobacter oxydans [TaxId: 290633]
 d2agta_ :     (SER2)  (SER290)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Aldose reductase (aldehyde reductase) |Human (Homo sapiens) [TaxId: 9606]
 d3lboa_ :     (SER2)  (SER290)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Aldose reductase (aldehyde reductase) |Human (Homo sapiens) [TaxId: 9606]
 d3d3fa_ :     (ASP7)  (ALA260)   [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1