Protein Concepts Dictionary

Tableau information

Concept source:  d4e46a_  amino acid (a.a.) range (ASP11)(ASN278)

nSSEs in this Concept: 21

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEHEHEHHHHHHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP11)   (GLU16) E1
	   (GLU20)   (GLY28) E2
	   (VAL35)   (ASN41) E3
	   (ARG49)   (VAL55) H4
	   (HIS59)   (ASP65) E5
	   (SER72)   (ASP76) E6
	   (PHE81)   (GLY96) H7
	  (VAL101)  (ASP106) E8
	  (ASP106)  (ASN119) H9
	  (LYS124)  (GLU130) E10
	  (THR137)  (PRO142) H11
	  (ARG146)  (ARG153) H12
	  (ASP156)  (ASN166) H13
	  (ALA167)  (VAL177) H14
	  (THR182)  (LEU194) H15
	  (LYS195)  (LEU209) H16
	  (ALA216)  (SER232) H17
	  (LYS236)  (THR242) E18
	  (PRO249)  (LEU259) H19
	  (ASN261)  (ASP266) E20
	  (TYR273)  (ASN278) H21

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                 
E2      140.2°   E2                                                                                                                                          
E3      -79.0°  134.4°   E3                                                                                                                                   
H4      100.1°  -43.2°  171.1°   H4                                                                                                                            
E5      -60.7°  157.6°  -24.5° -159.2°   E5                                                                                                                     
E6      -38.2° -161.4°  -40.8°  137.5°  -26.4°   E6                                                                                                              
H7      106.9°  -51.5°  158.7°  -30.0°  142.7°  141.8°   H7                                                                                                       
E8      -82.9°  128.7°   -6.2°  166.0°  -30.6°  -44.8°  161.4°   E8                                                                                                
H9       56.8°  -84.0°  133.1°  -43.9°  117.5°   93.6°  -61.7° -134.9°   H9                                                                                         
E10    -103.6°  110.2°  -24.9°  153.0°  -47.6°  -65.4°  145.1°  -20.7° -152.9°   E10                                                                                 
H11    -157.3°   43.9° -111.9°   72.2° -122.1° -148.5°   55.9° -109.8°  115.1°  -89.9°   H11                                                                          
H12     -36.5° -141.7°   82.5° -102.1°   58.0°   52.5°   90.5°   88.5°  -71.5°  104.6°  122.7°   H12                                                                   
H13    -134.0°   60.7°  114.1°  -73.0° -113.7° -136.7°   47.1°  114.8° -108.2°   98.9°   23.7°  -99.0°   H13                                                            
H14     129.1°  -26.4°  118.2°   55.6°  141.9°  135.1°  -74.5°  112.0°   83.9°   98.8°   64.8° -155.2°   85.3°   H14                                                     
H15     -19.0°  145.5°  -79.7°  102.4°  -56.8°  -42.5°   99.3°  -85.0°   63.8° -104.2°  139.9°  -17.6° -116.1°  145.0°   H15                                              
H16      77.9°  -75.9°  -98.9°   72.3°  108.2°   86.9° -102.3°  -95.2°   59.9° -100.2°  118.0° -113.4°  136.4°   53.2°   96.5°   H16                                       
H17     119.0°  -21.2° -147.6°   26.5° -170.0°  148.1°   47.2° -141.4°   63.3° -126.8°   62.5°  128.6°   74.2°  -29.4°  126.5°  -62.9°   H17                                
E18    -117.1°   97.5°  -38.3°  140.7°  -60.1°  -78.9°  133.1°  -34.1° -161.1°  -13.5°   77.2°  115.2°   88.7°   89.2° -116.9° -102.0° -115.6°   E18                         
H19      66.1°  -75.4°  143.0°  -34.2°  126.5°  103.4°  -52.3°  144.7°   10.0°  161.4° -105.1°  -76.8°  -99.3°  -78.4°   71.3°   63.2°  -55.2° -164.7°   H19                  
E20    -130.0°   89.3°  -53.5°  129.3°  -69.3°  -93.2°  112.8°  -51.3°  173.2°  -32.3°   58.5°  113.4°   67.0°  -90.8° -122.3° -119.9° -110.2°  -22.0° -163.4°   E20           
H21     168.6°   30.9° -112.4°   68.9° -129.7° -153.1°   62.1°  108.5°  112.5°   87.8°   18.2°  140.5°   41.6°  -47.5°  157.0° -100.6°  -51.8°   74.3° -103.0°   60.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4k2ab_ :     (SER8)  (SER296)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bradyrhizobium elkanii [TaxId: 29448]
 d3a2ma_ :     (GLU8)  (VAL304)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bradyrhizobium japonicum [TaxId: 375]
 d4kafb_ :    (ASP21)  (ASN288)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus sp. [TaxId: 1831]
 d3g9xa_ :    (ASP11)  (ASN278)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus sp. [TaxId: 1831]
 d3a2na_ :    (ARG10)  (VAL304)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bradyrhizobium japonicum [TaxId: 375]
 d4kaab_ :    (ASP22)  (ASN289)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus sp. [TaxId: 1831]
 d3rk4a_ :    (ASP11)  (HIS295)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus rhodochrous [TaxId: 1829]
 d4f60a_ :    (ASP11)  (ASN278)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus rhodochrous [TaxId: 1829]
 d3a2la_ :     (GLU8)  (VAL304)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bradyrhizobium japonicum [TaxId: 375]
 d3fbwa_ :    (ASP11)  (ASN278)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus rhodochrous [TaxId: 1829]
 d3fwha_ :    (ASP11)  (ASN278)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus sp. [TaxId: 1831]
 d4hzga_ :    (ASP11)  (HIS294)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus sp. [TaxId: 1831]
 d4kaaa_ :    (ASP22)  (ASN289)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus sp. [TaxId: 1831]
 d3a2mb_ :     (GLU6)  (ARG305)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bradyrhizobium japonicum [TaxId: 375]
 d4wcva_ :    (ASP11)  (HIS294)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus rhodochrous [TaxId: 1829]
 d4f5za_ :    (ASP11)  (ASN278)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus rhodochrous [TaxId: 1829]
 d4k2aa_ :     (SER8)  (ALA301)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bradyrhizobium elkanii [TaxId: 29448]
 d4k2ac_ :     (SER8)  (LEU303)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bradyrhizobium elkanii [TaxId: 29448]
 d4kafa_ :    (ASP21)  (ASN288)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus sp. [TaxId: 1831]
 d2v9za_ :    (PRO12)  (PRO279)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus rhodochrous [TaxId: 1829]
 d4e46a_ :    (ASP11)  (ASN278)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Rhodococcus rhodochrous [TaxId: 1829]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69