Protein Concepts Dictionary

Tableau information

Concept source:  d1asba_  amino acid (a.a.) range (LEU58)(LYS344)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEHEHEHEHHHEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU58)   (GLU70) H1
	   (ILE83)   (LEU94) H2
	   (GLY96)  (LYS105) H3
	  (ARG106)  (GLN111) E4
	  (GLY114)  (THR130) H5
	  (LYS133)  (SER138) E6
	  (ASN144)  (GLY153) H7
	  (GLU155)  (ALA160) E8
	  (PHE171)  (ASN179) H9
	  (ASP185)  (HIS190) E10
	  (THR202)  (LYS216) H11
	  (LEU219)  (ALA225) E12
	  (TYR226)  (ARG231) H13
	  (GLY232)  (GLU238) H14
	  (GLU238)  (HIS247) H15
	  (ILE251)  (SER257) E16
	  (GLU265)  (ALA275) E17
	  (GLU278)  (ASN294) H18
	  (HIS301)  (SER311) H19
	  (ASP313)  (LYS344) H20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                          
H2      157.3°   H2                                                                                                                                   
H3      -46.9°  122.2°   H3                                                                                                                            
E4      -81.7°  120.7° -104.5°   E4                                                                                                                     
H5       77.1°  -89.7°   32.5°  128.4°   H5                                                                                                              
E6     -136.5°   54.7°  176.6°  -77.1°  144.4°   E6                                                                                                       
H7       45.0° -123.8°   -1.9°  103.7°  -34.1° -178.5°   H7                                                                                                
E8      148.5°   31.3°  151.1° -102.8°  119.5°  -26.4°  152.4°   E8                                                                                         
H9      -54.3° -118.4°   -9.9°  101.2°  -30.5°  167.5°  -11.4°  149.4°   H9                                                                                  
E10     104.3°   85.8° -151.0°  -60.7°  170.7°  -32.4°  149.1°  -54.9°  155.7°   E10                                                                          
H11     -60.8° -109.4°   13.9°  110.5°   20.6°  162.7°  -15.7°  140.0°   -9.9° -164.6°   H11                                                                   
E12     -93.4°  101.8° -135.7°  -40.6° -167.4°  -47.3°  134.1°  -72.8°  137.0°  -20.7°  146.8°   E12                                                            
H13     144.3°   30.6°  145.9° -109.1° -115.6°   32.1° -146.9°    7.1° -146.0°   58.0° -136.2°   77.0°   H13                                                     
H14    -101.2°  -70.7°   54.3°  123.2°  -26.1°  122.3°  -56.2°  102.0°  -48.2°  154.5°   40.5°  156.4°  100.6°   H14                                              
H15      66.7°  -94.9°   32.7°  137.2°   19.8°  145.6°  -33.5°  119.4°  -36.8° -152.7°  -28.6° -158.1° -113.5°  -44.1°   H15                                       
E16     -90.7°  105.9° -131.0°  -34.7°  161.7°  -51.8°  129.5°  -77.8°  131.5°  -26.7°  141.4°   -6.0°  -82.2°  153.3° -157.0°   E16                                
E17      93.1°  -66.4°   61.6°  163.4°  -35.2°  116.3°  -62.6°   89.9°  -63.5°  135.8°  -53.9°  156.0°   84.3°  -42.3°   29.6°  161.8°   E17                         
H18     -81.1°  121.4°  -93.1°  -15.8°  113.4°  -87.9°   92.8° -111.5°   88.2°  -75.8°   96.9°  -56.1°  118.3°  107.6°  125.0°  -50.3°  147.9°   H18                  
H19     106.2°   59.6° -120.9°  124.6° -106.4°   59.5° -120.5°   45.6° -128.4°   64.3° -121.2°   84.1°   39.3° -109.2°  -92.6°   89.9°  -71.9°  140.1°   H19           
H20    -150.0°  -50.2°  120.4°   76.2° -101.2°  -56.9° -122.0°  -58.1°  110.6°  -82.2°  108.8°   82.8°  -63.8°   75.3°  118.9°   82.6° -102.4°   72.2° -103.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qira_ :    (LEU50)  (GLY345)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d4effa_ :    (LEU48)  (ALA334)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
 d3k7ya_ :    (ASP50)  (ASN340)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
 d1aiaa_ :    (THR51)  (ASP313)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1aawa_ :    (LEU58)  (GLU343)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1asba_ :    (LEU58)  (LYS344)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1asfa_ :    (LEU58)  (ASN312)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1qita_ :    (LEU50)  (ARG327)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d3zzja_ :    (LEU46)  (GLY333)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67