Protein Concepts Dictionary

Tableau information

Concept source:  d1kphb_  amino acid (a.a.) range (HIS8)(LYS287)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEHEEHHEHHHEHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (HIS8)   (ASP17) H1
	   (SER19)   (LEU25) H2
	   (LEU45)   (GLY61) H3
	   (MET66)   (GLY72) E4
	   (GLY76)   (ASP87) H5
	   (ASN89)   (LEU95) E6
	   (SER96)  (SER110) H7
	  (ARG114)  (LEU120) E8
	  (ASP131)  (GLY137) E9
	  (ALA138)  (GLY143) H10
	  (TYR147)  (LEU158) H11
	  (GLY162)  (LEU172) E12
	  (HIS173)  (GLU179) H13
	  (SER185)  (ILE199) H14
	  (SER207)  (GLY219) H15
	  (GLY219)  (LEU228) E16
	  (LEU228)  (LYS247) H17
	  (LYS247)  (LEU253) H18
	  (SER255)  (GLY276) H19
	  (TYR277)  (LYS287) E20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                          
H2       58.3°   H2                                                                                                                                   
H3     -145.0°  102.4°   H3                                                                                                                            
E4       85.4°   94.1°  127.5°   E4                                                                                                                     
H5      -82.8°  -72.5°  -62.8°  165.5°   H5                                                                                                              
E6      -98.4°  104.7°  115.5°  -13.8°  175.8°   E6                                                                                                       
H7       69.4°  -83.6°  -80.2°  151.7°  -24.7° -159.3°   H7                                                                                                
E8     -108.6°  111.4°  105.6°  -24.1°  168.4°  -10.4° -161.7°   E8                                                                                         
E9       64.6°   75.8°  144.1°  -22.6°  143.2°  -36.3°  133.9°  -46.6°   E9                                                                                  
H10     141.3°  124.5°   73.4°   56.5° -135.9°   43.1° -144.7°   32.8°  -78.4°   H10                                                                          
H11     -87.7°  -91.8°  -62.4°  166.7°  -20.3°  163.2°  -18.3°  156.2°  152.2°  128.0°   H11                                                                   
E12      76.2°   73.3°  129.5°  -21.0°  145.5°  -32.2°  145.1°  -41.0°   14.8°  -69.6° -162.1°   E12                                                            
H13     -49.9°   10.3°  112.7°  -87.3°   78.6°  -99.1°   85.9° -106.9°  -67.5° -125.7°   96.8°  -66.9°   H13                                                     
H14      97.3° -147.4°  -85.7° -105.8°  -84.1°  -99.7°   66.6°  -96.2°  115.4°  -88.1°   63.8°  125.2°  144.3°   H14                                              
H15    -128.9° -120.2°  -31.9°  139.9°  -54.5°  126.3°  -60.2°  116.3°  162.3°   85.5°  -42.6°  154.7°  129.2°  -56.0°   H15                                       
E16      24.1°   55.7°  158.0°  -63.1°  103.7°  -76.7°   93.3°  -87.1°  -41.3° -119.6°  111.4°  -52.1°  -45.4°  111.2°  153.0°   E16                                
H17      58.9°  113.3° -143.0°  -60.8°  118.7°  -65.1°   94.2°  -70.6°  -59.1°  -93.1°  105.9°  -72.5° -103.2°   59.0°  115.0°   57.9°   H17                         
H18     131.1° -167.7°  -73.5°  -79.9°  114.3°  -67.9°  106.8°  -59.9° -100.5°  -43.4°   96.3° -100.1° -166.8°   44.8°   62.2° -128.4°  -73.3°   H18                  
H19     -99.8°  -44.2°   58.9°  113.8°  -60.4°  115.4°  -84.0°  114.0°  106.8°  101.4°  -78.6°   96.4°   54.3° -137.8°  -83.5°  -99.7° -157.4°  128.8°   H19           
E20    -121.1° -109.1°  -32.2°  151.2°  -43.1°  137.4°  -51.7°  127.2°  173.7°   95.4°  -33.5°  161.5°  117.8°  -62.7°  -11.7°  144.8°  120.6°   73.9°  -75.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1kpga_ :    (ALA10)  (LYS287)   [view usage] : c.66.1.18 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Mycolic acid cyclopropane synthase |CmaA1 |Mycobacterium tuberculosis [TaxId: 1773]
 d1tpya_ :    (GLU10)  (LYS287)   [view usage] : c.66.1.18 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Mycolic acid cyclopropane synthase |Methoxy mycolic acid synthase 2, Mma2 |Mycobacterium tuberculosis [TaxId: 1773]
 d1kpgb_ :    (ALA10)  (LYS287)   [view usage] : c.66.1.18 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Mycolic acid cyclopropane synthase |CmaA1 |Mycobacterium tuberculosis [TaxId: 1773]
 d1kphb_ :     (HIS8)  (LYS287)   [view usage] : c.66.1.18 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Mycolic acid cyclopropane synthase |CmaA1 |Mycobacterium tuberculosis [TaxId: 1773]
 d1kpia_ :    (GLU18)  (LYS302)   [view usage] : c.66.1.18 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Mycolic acid cyclopropane synthase |CmaA2 |Mycobacterium tuberculosis [TaxId: 1773]
 d1kpha_ :     (HIS8)  (LYS287)   [view usage] : c.66.1.18 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Mycolic acid cyclopropane synthase |CmaA1 |Mycobacterium tuberculosis [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66