Protein Concepts Dictionary

Tableau information

Concept source:  d3b3ta_  amino acid (a.a.) range (GLN7)(ALA289)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: HHHEEEHEEHEEHHEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLN7)   (VAL17) H1
	   (ALA19)   (SER31) H2
	   (THR39)   (SER57) H3
	   (ASN62)   (SER71) E4
	   (ASN74)   (GLU86) E5
	   (GLU90)   (GLY95) E6
	  (GLY114)  (ASN136) H7
	  (ASN136)  (LYS140) E8
	  (ARG141)  (ALA150) E9
	  (ARG156)  (GLY169) H10
	  (VAL173)  (ASP179) E11
	  (ASP189)  (ASP195) E12
	  (SER199)  (GLU211) H13
	  (GLU211)  (LEU216) H14
	  (LEU216)  (GLY224) E15
	  (ALA231)  (GLY237) H16
	  (PRO239)  (PHE244) E17
	  (ASN252)  (THR257) H18
	  (THR261)  (SER265) H19
	  (GLY269)  (ALA289) H20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                          
H2       53.8°   H2                                                                                                                                   
H3      128.7°  152.1°   H3                                                                                                                            
E4      -64.5°  -27.9°  166.1°   E4                                                                                                                     
E5      147.6°  152.6°   19.8°  147.8°   E5                                                                                                              
E6      -18.4°  -61.2°  131.9°  -62.0°  145.5°   E6                                                                                                       
H7      127.0°  133.3°  -18.9°  152.9°   30.0° -137.5°   H7                                                                                                
E8     -138.4°  -91.8°  -92.8°   74.4°  -73.4°  129.1°   93.0°   E8                                                                                         
E9      -32.9°  -32.3°  161.6°  -32.0°  173.9°  -31.5° -155.2°  105.5°   E9                                                                                  
H10     161.4°  114.1°  -53.9°  112.3°  -39.7° -174.3°   47.9°  -46.1°  143.0°   H10                                                                          
E11     -18.5°  -66.6°  125.1°  -68.8°  139.5°   -6.8°  131.0°  135.0°  -37.9°  178.9°   E11                                                                   
E12     112.0°   59.0° -114.9°   51.2°  -99.4°  113.2° -105.2°  -35.5°   82.2°  -61.1°  119.9°   E12                                                            
H13     -78.3° -130.4°   54.3° -139.5°   70.0°  -77.6°   64.7°  137.2° -108.6°  108.1°  -70.9° -169.2°   H13                                                     
H14     -39.1°  -72.1°  129.6°  -62.6°  134.9°   20.6°  143.4° -114.8°  -39.9° -157.9°   22.8° -111.3°  -78.6°   H14                                              
E15      81.5°   30.7° -144.4°   22.8° -130.1°   83.1° -130.5°  -61.2°   51.7°  -91.3°   89.6°  -30.7°  159.9°   85.4°   E15                                       
H16     150.1°   96.8°  -79.2°   87.0°  -61.7°  147.3°   75.2°  -20.3°  119.0°  -27.3° -153.8°  -38.1°  131.5° -135.0°  -68.6°   H16                                
E17     -35.4°  -86.8°  106.4°  -87.2°  119.3°  -26.3°  116.0°  140.8°  -57.7°  159.0°  -20.3°  138.3°  -52.3°   28.8°  109.1° -160.4°   E17                         
H18      65.5°   30.9°  121.2°  -57.0°  126.8°   80.3°  102.6°  -97.9°  -59.1°   96.9°   83.2°  -62.9°  121.6°   97.0°  -48.1°  -92.0°  100.5°   H18                  
H19    -129.5°  149.6°  -55.5°  121.8°  -44.3°  113.6°  -72.5°   68.0°  129.6°  -68.6°  111.3°  103.5°  -70.4°   95.2°  123.7°  -72.4°   94.9° -164.4°   H19           
H20     153.0°  108.3°  -56.2°  110.2°  -44.6° -169.2°  -47.1°   50.0°  139.0°    8.3° -171.4°  -59.1°  110.2° -164.5°  -88.2°   30.0°  162.6°  -89.1°   76.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3b3ta_ :     (GLN7)  (ALA289)   [view usage] : c.56.5.4 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Bacterial dinuclear zinc exopeptidases |Aminopeptidase |Aeromonas proteolytica [TaxId: 671]
 d3b35a_ :     (GLN7)  (ALA289)   [view usage] : c.56.5.4 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Bacterial dinuclear zinc exopeptidases |Aminopeptidase |Aeromonas proteolytica [TaxId: 671]
 d1ampa_ :     (GLN7)  (ALA289)   [view usage] : c.56.5.4 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Bacterial dinuclear zinc exopeptidases |Aminopeptidase |Aeromonas proteolytica [TaxId: 671]
 d3b3va_ :     (GLN7)  (ALA289)   [view usage] : c.56.5.4 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Bacterial dinuclear zinc exopeptidases |Aminopeptidase |Aeromonas proteolytica [TaxId: 671]
 d2anpa1 :     (GLN7)  (ALA289)   [view usage] : c.56.5.4 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Bacterial dinuclear zinc exopeptidases |Aminopeptidase |Aeromonas proteolytica [TaxId: 671]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.56