Protein Concepts Dictionary

Tableau information

Concept source:  d1on3e1  amino acid (a.a.) range (THR12)(LEU256)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: HHHEEEEHEHEEHEEHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR12)   (ALA29) H1
	   (ARG34)   (GLN42) H2
	   (THR46)   (LEU54) H3
	   (SER59)   (GLY64) E4
	   (PHE66)   (THR71) E5
	   (GLY85)   (ARG90) E6
	   (ARG96)  (THR106) E7
	  (GLY113)  (GLY131) H8
	  (PRO133)  (PHE137) E9
	  (ILE149)  (SER166) H10
	  (PRO170)  (ILE175) E11
	  (GLY177)  (GLY181) E12
	  (GLY181)  (THR190) H13
	  (ASP191)  (LYS197) E14
	  (LYS198)  (PHE202) E15
	  (PRO206)  (VAL212) H16
	  (GLY224)  (MET229) H17
	  (MET229)  (GLY233) H18
	  (HIS236)  (GLU240) E19
	  (ASP242)  (LEU256) H20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                          
H2       39.8°   H2                                                                                                                                   
H3       98.2°  -58.9°   H3                                                                                                                            
E4       90.8°  126.5°  145.4°   E4                                                                                                                     
E5       58.8°   92.9°  132.7°   33.6°   E5                                                                                                              
E6     -114.3°  -76.0°  -17.9°  132.4°  133.3°   E6                                                                                                       
E7       70.3°  106.9°  161.3°  -52.0°  -54.4°  172.1°   E7                                                                                                
H8     -101.9°  -64.0°   -9.4°  136.1°  127.5°   12.4° -170.0°   H8                                                                                         
E9       68.1°   99.9°  147.7°  -66.3°  -66.4°  159.5°  -14.4°  157.0°   E9                                                                                  
H10     -88.6°  -49.9°   10.3°  142.7°  123.8°   26.1° -156.1°   14.2° -145.1°   H10                                                                          
E11     -66.5°   96.4°  142.6°  -71.4°  -70.0°  154.9°  -19.4°  151.9°   -5.1° -140.2°   E11                                                                   
E12      73.3°   94.0° -110.5°   40.8°   28.1° -106.4°   80.9° -103.2°   93.9° -104.2°  -97.9°   E12                                                            
H13     -99.5°  -60.9°   -4.9°  140.5°  129.6°   15.1° -165.7°    4.5° -152.4°   11.0° -147.4° -106.3°   H13                                                     
E14     -72.8°   90.1°  121.9°  -92.7°  -92.1°  132.2°  -41.5°  131.2°  -27.3°  122.5°  -22.7° -120.2° -126.8°   E14                                              
E15      74.7°   91.2° -103.7°   46.7°   34.5°  -99.6°   87.8°  -96.3°  100.6°  -97.6°  104.5°    6.9°  -99.4° -126.6°   E15                                       
H16      41.9°   74.6° -120.1°   51.9°   18.2° -126.6°   61.2° -117.4°   69.8° -110.1°  -72.1°   34.6° -118.1°  -91.3°   38.6°   H16                                
H17      71.2°  -52.0°  -50.7°  102.5°   82.0°  -55.2°  132.5°  -46.1°  137.3°  -42.7°  137.0°   62.1°  -47.6° -140.9°   55.8°   71.6°   H17                         
H18      84.1°  -88.1°  -86.0°   61.7°   53.5°  -80.5°  106.7°  -78.0°  119.7°  -81.1°  123.6°   25.9°  -81.4°  145.4°   19.1°   55.0°  -42.4°   H18                  
E19     -94.8° -101.6°  110.4° -102.0° -112.1°  114.5°  -57.9°  118.2°  -45.9°  115.3°  -42.8° -138.6°  114.8°  -24.0° -145.5° -114.5° -151.9°  163.6°   E19           
H20     103.0°   76.1°  -39.2°  106.2°  101.7°  -31.7°  155.7°  -30.1°  167.5°   38.3°  168.8°   74.8°   34.3°  160.8°  -67.9°   97.7°   32.0°  -49.0°  146.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1on9e1 :    (THR12)  (LEU256)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) |Propionibacterium freudenreichii [TaxId: 1744]
 d1on3b1 :    (THR12)  (SER254)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) |Propionibacterium freudenreichii [TaxId: 1744]
 d1on3d1 :    (THR12)  (SER254)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) |Propionibacterium freudenreichii [TaxId: 1744]
 d1on3a1 :    (THR12)  (SER254)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) |Propionibacterium freudenreichii [TaxId: 1744]
 d1on3e1 :    (THR12)  (LEU256)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) |Propionibacterium freudenreichii [TaxId: 1744]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14