Protein Concepts Dictionary

Tableau information

Concept source:  d1ptva_  amino acid (a.a.) range (GLU2)(GLY283)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: HHHEEEEHEEEEEEHHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLU2)   (GLY14) H1
	   (TRP16)   (ALA27) H2
	   (CYS32)   (LEU37) H3
	   (ARG56)   (HIS60) E4
	   (ASP63)   (ASN68) E5
	   (ASN68)   (MET74) E6
	   (ARG79)   (GLN85) E7
	   (THR91)  (LYS103) H8
	  (ARG105)  (ASN111) E9
	  (GLU132)  (ASP137) E10
	  (ASN139)  (LEU144) E11
	  (ILE145)  (THR151) E12
	  (TYR152)  (ASN162) E13
	  (GLN166)  (TYR176) E14
	  (SER187)  (GLY202) H15
	  (SER205)  (GLY209) H16
	  (VAL211)  (SER216) E17
	  (GLY220)  (LYS237) H18
	  (ILE246)  (ARG254) H19
	  (ALA264)  (GLY283) H20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                          
H2      114.8°   H2                                                                                                                                   
H3      -62.2°  -81.9°   H3                                                                                                                            
E4     -123.3°   53.4°   61.2°   E4                                                                                                                     
E5      -63.1° -155.4° -114.3°  150.1°   E5                                                                                                              
E6      124.5°  103.7°  165.8°  111.5°  -65.2°   E6                                                                                                       
E7      -34.7°  -92.4°  -28.6°  -88.8°   94.7°  159.0°   E7                                                                                                
H8      151.6°   80.2°  146.1°   85.1°  -93.0°  -28.2°  172.3°   H8                                                                                         
E9      -14.1° -128.3°  -71.8° -132.4°   49.4°  112.6°  -46.5°  140.8°   E9                                                                                  
E10      84.9°  -41.0°   91.3°  -92.8°  117.1° -101.5°   81.8°  -93.8°   95.0°   E10                                                                          
E11     -81.4°  162.2° -100.6°  112.3°  -37.8°   70.0°  -98.1°   88.6°  -68.5°  155.0°   E11                                                                   
E12     -51.3° -147.5° -107.7° -158.1°   13.4°   74.6°  -84.6°  102.8°  -38.2°  106.8°  -48.6°   E12                                                            
E13     122.7°   17.7°   75.3°   35.9° -170.1° -106.2°   93.2°  -79.0°  136.8°  -58.3°  146.1° -165.2°   E13                                                     
E14     -46.3° -148.0° -102.1° -154.8°   17.2°   80.1°  -79.2°  108.3°  -32.9°  107.1°  -49.1°   -5.6°  164.7°   E14                                              
H15     148.0°   39.4°   90.7°   32.4° -148.8°  -85.9°  114.9°  -57.7°  161.3°  -78.5°  122.8°  160.4°  -26.6°  165.7°   H15                                       
H16      77.9°  -39.5°   49.8°   63.5° -139.1° -140.4°   53.0°  119.7°  -92.0°  -43.4° -149.6° -125.8°   44.9° -122.0°   71.2°   H16                                
E17      -9.2° -110.2°  -53.1° -114.1°   70.8°  133.4°  -25.7°  160.8°  -21.5°   85.0°  -84.7°  -59.6°  115.8°  -54.4°  139.9°   71.7°   E17                         
H18     140.9°   91.6°  154.7°   95.4°  -80.8°  -16.5° -175.4°  -12.2°  129.0°  -99.8°   78.6°   90.8°  -91.2°   96.3°  -69.6° -130.8°  149.9°   H18                  
H19     -91.4°  -33.9°   48.1°   46.2° -154.5°  137.0°  -61.4°  110.9° -105.3°  -54.6° -146.1° -141.7°   32.0° -137.3°   56.7°  -17.3°  -84.0°  123.0°   H19           
H20    -149.9°   95.3°  125.6°   73.8°   89.8°  -41.7°  151.0°  -29.9°  136.2° -121.2°   68.7°  102.9°  -86.1°  107.0°  -59.6° -130.8°  153.0°  -30.4°  115.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1suga_ :     (MET3)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1g1fa_ :     (MET3)  (MET282)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1nl9a_ :     (GLU2)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1oesa_ :     (MET3)  (ILE281)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1c83a_ :    (SER15)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1gfya_ :     (GLU4)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1i57a_ :     (GLU2)  (ARG257)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1ptta_ :     (GLU2)  (MET282)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1nwla_ :     (GLU2)  (ILE281)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1ptya_ :     (GLU4)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d2bgea_ :     (MET1)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d2vexa_ :    (SER15)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d2cnia_ :     (MET1)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1bzja_ :     (GLU4)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1pa1a_ :   (MET503)  (ARG754)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d4bjob_ :     (SER1)  (PHE280)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1aaxa_ :     (GLU4)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1ptva_ :     (GLU2)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1eena_ :     (MET3)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d1lqfa_ :   (LYS497)  (MET758)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.45