Protein Concepts Dictionary

Tableau information

Concept source:  d2qeea_  amino acid (a.a.) range (ARG6)(ILE259)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: HEHHHHHHHHEHEHHHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG6)   (ASN19) H1
	   (PRO21)   (HIS26) E2
	   (GLY35)   (LEU39) H3
	   (ILE42)   (TYR48) H4
	   (TYR48)   (TRP58) H5
	   (SER62)   (MET69) H6
	   (SER70)   (ARG86) H7
	   (SER90)  (GLY104) H8
	  (ASP111)  (LYS122) H9
	  (SER124)  (ASN136) H10
	  (SER138)  (PHE147) E11
	  (ASP148)  (GLY158) H12
	  (HIS166)  (ASP172) E13
	  (ASP172)  (TYR178) H14
	  (LYS182)  (GLY189) H15
	  (ASN197)  (ARG214) H16
	  (TYR219)  (PRO225) E17
	  (SER234)  (CYS243) H18
	  (LEU245)  (HIS251) H19
	  (ILE253)  (ILE259) E20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                          
E2      -63.5°   E2                                                                                                                                   
H3     -146.7°   90.1°   H3                                                                                                                            
H4      111.1°   50.1°  -54.7°   H4                                                                                                                     
H5     -108.7°   64.6°   38.3°  -59.6°   H5                                                                                                              
H6      -64.5° -128.0°  138.7° -161.5°  138.6°   H6                                                                                                       
H7      169.1°  109.0°   22.6°   64.6°   60.4° -122.9°   H7                                                                                                
H8      -78.6° -141.7° -121.9°  166.4° -127.6°   16.8° -107.5°   H8                                                                                         
H9      -52.3°  -98.7°  159.4°  118.7° -160.4°  -43.6°  138.6°   59.1°   H9                                                                                  
H10     160.3°  113.4°   47.5°  -63.3°   85.2°  114.2°   28.3°  104.3°  112.0°   H10                                                                          
E11     -46.6°  -17.2°  106.8°   65.6°   77.7° -110.9°  126.1° -125.1°  -84.1°  127.9°   E11                                                                   
H12      71.6° -123.0° -141.6° -130.8°  169.2°   31.2° -119.1°   41.6°   24.3°  -97.4° -108.3°   H12                                                            
E13     -80.2°  -16.8°   73.9°   35.6°   53.4° -144.7°   92.2° -157.4° -112.5°   98.3°  -33.9° -135.9°   E13                                                     
H14     -81.1°  -19.1°   77.0°   31.1°  -61.4° -143.9°   92.8° -159.6° -106.3°   94.3°  -34.7° -128.5°   -9.8°   H14                                              
H15      44.7°  104.7° -164.9° -138.5°  147.5°  -26.4° -145.1°   43.2°  -22.2° -125.8°   87.8°  -28.4° -121.1° -118.2°   H15                                       
H16     102.8°  151.6°  -91.0° -144.5°  100.4°   48.2°  -80.2°   31.5°   90.0°  -87.7°  143.4°   69.4°  151.9°  161.3°   74.5°   H16                                
E17    -105.9°  -49.4°   42.3°   40.6°   20.5° -156.5°   64.1° -148.0° -147.8°   82.2°  -65.2° -170.2°  -35.3°  -42.1°  150.6°  120.3°   E17                         
H18      88.0°  131.1° -125.4° -121.1° -162.2°   43.2° -102.9°   48.0°   37.4°  -80.3°  119.6°   17.1°  139.1°  129.8°   45.5°  -68.8° -159.9°   H18                  
H19      99.8°  159.2° -109.7° -137.7° -135.7°   36.5°  -89.2°   28.7°   60.5°  -77.9°  143.4°   36.2°  168.9°  159.1°   56.1°  -39.1° -151.3°  -30.3°   H19           
E20    -112.1°  -65.6°   34.7°  -57.0°   -3.9°  141.4°   57.0° -129.4° -163.1°   81.4°  -79.4°  170.5°  -53.4°  -61.0°  151.5°  101.1°  -19.2° -159.5° -135.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2pnkk_ :     (SER5)  (ILE259)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2qeea_ :     (ARG6)  (ILE259)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2q08a_ :     (SER5)  (ILE259)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2qeec_ :     (ARG6)  (ILE259)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2pnki_ :     (SER5)  (ILE259)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d3hk7a_ :     (SER5)  (ILE259)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2qeef_ :     (ARG6)  (ILE259)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d3hkaa_ :     (SER5)  (ILE259)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1