Protein Concepts Dictionary

Tableau information

Concept source:  d1llqa1  amino acid (a.a.) range (ILE296)(GLN568)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHHEHHEHEEEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE296)  (LYS315) H1
	  (GLU321)  (GLY327) E2
	  (ALA330)  (GLY347) H3
	  (LYS350)  (ARG356) H4
	  (ARG356)  (ASP361) E5
	  (ASN374)  (ALA381) H6
	  (SER389)  (ARG398) H7
	  (GLY400)  (SER406) E8
	  (VAL408)  (ASN413) H9
	  (ASN413)  (ASN424) H10
	  (PRO427)  (SER433) E11
	  (THR442)  (ASN451) H12
	  (LEU455)  (GLY459) E13
	  (PRO463)  (ASN468) E14
	  (HIS470)  (GLN476) E15
	  (ASN478)  (GLN494) H16
	  (ASN500)  (SER512) H17
	  (THR515)  (GLY522) H18
	  (ARG532)  (GLY550) H19
	  (GLU562)  (GLN568) H20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                          
E2      140.0°   E2                                                                                                                                   
H3      -54.0° -165.8°   H3                                                                                                                            
H4       86.1°  -54.9°  139.4°   H4                                                                                                                     
E5      133.1°   -6.9° -172.5°  -48.1°   E5                                                                                                              
H6      -20.1° -142.6°   48.4°  -96.8° -136.9°   H6                                                                                                       
H7      -55.4°  163.2°   -4.6° -141.4°  169.1°   47.8°   H7                                                                                                
E8      153.5°  -17.5°  150.7°  -67.7°  -23.4° -160.1°  150.3°   E8                                                                                         
H9      -13.2°  138.3°  -54.0°   89.1°  132.0°    8.8°  -54.2°  155.3°   H9                                                                                  
H10     -50.2°  169.3°   -3.8°  135.8°  175.5°   44.7°   -6.3° -154.5°  -50.3°   H10                                                                          
E11     159.1°  -26.3°  142.1°  -75.1°  -32.2° -168.8°  142.1°   -8.8° -163.8°  145.8°   E11                                                                   
H12     -23.5°  137.8°  -52.5°   94.5°  132.3°   -5.4°  -51.5°  155.2°   10.7°  -48.9°  163.6°   H12                                                            
E13     166.4°  -33.2°  134.3°  -83.5°  -39.6° -171.7°  133.9°  -16.4° -171.5°  138.1°   -8.4°  166.6°   E13                                                     
E14     -13.6°  131.1°  -61.7°   80.9°  124.6°  -16.4°  -62.1°  147.6°   -8.1°  -57.9°  155.8°  -16.4°  164.0°   E14                                              
E15     154.9°  -62.2°  103.5° -117.1°  -69.0°  137.1°  101.3°  -51.3°  145.8°  107.1°  -46.0°  135.7°  -38.2°  151.9°   E15                                       
H16     112.9° -106.5°   60.7° -150.3° -113.1°  108.6°   60.8°  -90.0°  114.7°   64.4°  -81.5° -112.0°  -73.6° -122.3°  -51.2°   H16                                
H17     -44.0°  107.3°  -85.7°   56.6°  101.6°  -63.7°  -89.3°  112.9°  -55.4°  -82.9°  115.8°  -65.9°  122.4°  -50.1°  157.6°  121.8°   H17                         
H18     -84.4°   63.7° -124.1°   47.8°   58.9°  -79.2° -121.4°   81.0°  -76.9° -121.2°   89.5°  -74.2°   95.0°   71.5° -103.7° -150.9°  -87.0°   H18                  
H19      99.6° -113.2°   54.1° -156.7° -118.8°   83.1°   50.3° -106.1°   91.8°   56.7° -101.3°   83.2°  -93.4°   99.3°  -55.3°  -46.2°  139.5° -109.9°   H19           
H20    -131.3°   23.2°  158.3°  -48.4°   22.5° -145.1° -161.7°   23.0° -137.1° -160.0°   28.0° -142.8°   36.3° -129.0°   73.8°  104.7°  -90.0°   76.8°  129.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3wjab2 :   (GLN281)  (MET554)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1o0sa1 :   (GLY298)  (GLN568)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Mitochondrial NAD(P)-dependent malic enzyme |Pig roundworm (Ascaris suum) [TaxId: 6253]
 d1llqa1 :   (ILE296)  (GLN568)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Mitochondrial NAD(P)-dependent malic enzyme |Pig roundworm (Ascaris suum) [TaxId: 6253]
 d1gq2a1 :   (GLN281)  (VAL557)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Mitochondrial NAD(P)-dependent malic enzyme |Domestic pigeon (Columba livia) [TaxId: 8932]
 d1llqb1 :   (GLY298)  (GLN568)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Mitochondrial NAD(P)-dependent malic enzyme |Pig roundworm (Ascaris suum) [TaxId: 6253]
 d3wjaa2 :   (GLN281)  (MET554)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2