Protein Concepts Dictionary

Tableau information

Concept source:  d1jcla_  amino acid (a.a.) range (THR2)(GLY249)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHHEHHEHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR2)   (LEU14) H1
	   (LEU17)   (ASN21) E2
	   (ASP26)   (ALA36) H3
	   (ALA44)   (TYR49) E4
	   (ILE53)   (GLY64) H5
	   (ARG69)   (ASN75) E6
	   (ILE85)   (GLY97) H7
	   (ASP99)  (VAL104) E8
	  (TYR107)  (GLY113) H9
	  (GLN116)  (ASN133) H10
	  (LEU135)  (GLU141) E11
	  (GLU141)  (LYS146) H12
	  (ASP147)  (GLY162) H13
	  (ASP164)  (THR168) E14
	  (THR178)  (GLY193) H15
	  (THR197)  (PRO202) E16
	  (THR208)  (GLY224) H17
	  (GLY224)  (ASP229) H18
	  (HIS232)  (ALA237) E19
	  (LEU241)  (GLY249) H20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                          
E2       61.5°   E2                                                                                                                                   
H3     -133.2°  164.3°   H3                                                                                                                            
E4       51.1°  -11.3°  169.8°   E4                                                                                                                     
H5     -120.6°  146.7°  -37.7°  151.9°   H5                                                                                                              
E6       71.3°  -36.0°  135.2°  -34.6°  168.2°   E6                                                                                                       
H7      -94.3°  124.2°  -65.4°  124.8°  -29.7°  159.4°   H7                                                                                                
E8     -101.1°  -54.2°  111.9°  -58.6°  138.3°  -29.9°  158.7°   E8                                                                                         
H9      102.1°  -85.5°   85.5°  -84.4° -122.8°   50.0° -150.3°  -38.8°   H9                                                                                  
H10      78.4°  120.9°  -72.3°  117.5°  -42.6°  148.9°  -17.9°  173.4° -147.7°   H10                                                                          
E11    -113.2°  -55.7°  108.7°  -63.9°  123.8°  -45.0°  138.6°  -20.2°  -54.7°  154.7°   E11                                                                   
H12     105.8°  -70.2°   97.5°  -72.4°  130.6°   38.9° -159.7°   18.1°  -21.3° -168.2°   33.7°   H12                                                            
H13      49.1°  108.9°  -86.7°   99.5°  -74.3°  117.0°  -56.3°  144.5°  119.3°  -38.5°  161.8°  137.4°   H13                                                     
E14    -121.4°  -60.1°  105.3°  -70.9°  106.3°  -64.2°  115.3°  -43.7°  -76.6°  131.1°  -23.6°  -56.5°  161.3°   E14                                              
H15      68.2°  120.5°  -69.4°  109.4°  -86.1°   99.7°  -87.8°  111.5°   75.9°  -74.5°  130.2°   96.6°  -45.5°  152.3°   H15                                       
E16    -114.5°  -58.4°  110.1°  -69.7°   97.8°  -75.4°   98.7°  -61.6°  -96.8°  112.6°  -42.5°  -76.1°  141.7°  -20.3°  172.6°   E16                                
H17      86.0°  124.0°  -59.8°  115.1°  -88.5°   92.9° -100.8°   94.9°   56.6°  -91.6°  111.0°   77.9°  -67.9°  130.6°  -22.8°  150.4°   H17                         
H18      30.8°   54.5° -140.3°   49.1° -108.3°   81.7°   78.7° -107.7°  126.4°   68.5° -109.3°  120.6°   58.5° -104.9°   94.0°  -90.7°  114.8°   H18                  
E19     -93.9°  -44.9°  127.5°  -55.2°  104.5°  -72.7°   94.4°  -70.1° -108.8°  103.4°  -55.1°  -87.5°  122.9°  -38.4°  162.1°  -21.6°  164.8°  -69.1°   E19           
H20    -142.1° -145.1°   28.9° -155.8°  -21.7°  146.5°  -50.2°  116.7°  105.8°  -64.3°  103.7°  109.6°  -94.4°   89.9°  -94.4°   87.1°  -88.4° -127.6°  100.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ktna_ :     (THR2)  (GLY249)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Deoxyribose-phosphate aldolase DeoC |Escherichia coli [TaxId: 562]
 d1jcla_ :     (THR2)  (GLY249)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Deoxyribose-phosphate aldolase DeoC |Escherichia coli [TaxId: 562]
 d1jclb_ :     (THR2)  (GLY249)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Deoxyribose-phosphate aldolase DeoC |Escherichia coli [TaxId: 562]
 d1jcja_ :     (THR2)  (GLY249)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Deoxyribose-phosphate aldolase DeoC |Escherichia coli [TaxId: 562]
 d1jcjb_ :     (THR2)  (GLY249)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Deoxyribose-phosphate aldolase DeoC |Escherichia coli [TaxId: 562]
 d1ktnb_ :     (THR2)  (GLY249)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Deoxyribose-phosphate aldolase DeoC |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1