Protein Concepts Dictionary

Tableau information

Concept source:  d1z7ac_  amino acid (a.a.) range (ILE27)(ARG299)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: EHHEHHEHEHEEEHHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE27)   (GLU36) E1
	   (MSE69)   (ALA81) H2
	   (ALA81)   (ASN94) H3
	   (VAL95)  (ALA101) E4
	  (ALA103)  (ASN109) H5
	  (PRO110)  (GLY120) H6
	  (GLY120)  (SER125) E7
	  (GLU138)  (THR156) H8
	  (VAL161)  (ARG167) E9
	  (GLY169)  (GLU179) H10
	  (LEU183)  (ASP187) E11
	  (LEU193)  (ALA199) E12
	  (GLU203)  (ILE209) E13
	  (ASN216)  (THR221) H14
	  (GLY229)  (GLY247) H15
	  (THR249)  (HIS259) E16
	  (HIS259)  (ARG265) H17
	  (MSE269)  (SER281) H18
	  (LYS284)  (ALA288) E19
	  (ARG290)  (ARG299) H20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                          
H2     -129.2°   H2                                                                                                                                   
H3     -156.9°  -27.8°   H3                                                                                                                            
E4      -38.4° -142.1° -149.2°   E4                                                                                                                     
H5       68.8°  -67.6°  -92.0° -105.2°   H5                                                                                                              
H6     -162.6°   34.0°    6.6° -145.7°  -98.6°   H6                                                                                                       
E7      -59.5° -148.9°  136.6°  -24.0° -128.2° -130.7°   E7                                                                                                
H8      100.7°  -36.6°  -59.5°  133.8°   32.5°  -66.0°  157.8°   H8                                                                                         
E9      -65.4°  156.4°  136.1°  -61.4°  109.8°  131.7°  -51.9°  132.4°   E9                                                                                  
H10     108.4°  -30.7°  -50.8°  111.4°   69.9°  -54.8°  122.2°  -50.9°  172.7°   H10                                                                          
E11     -73.2°  146.5°  127.2°  -71.3°  109.0°  123.4°  -60.6°  126.8°   -9.9°  177.2°   E11                                                                   
E12      63.7° -117.1° -118.6°   30.7° -117.0° -115.6°   34.1° -131.0°   85.4°  -88.3°   94.5°   E12                                                            
E13     -88.7°  103.5°   98.7° -110.2°   74.4°   99.7° -106.7°   80.9°  -54.9°  130.5°  -46.9°  139.2°   E13                                                     
H14     -53.5°  144.9°  141.5°  -66.1°   87.0°  140.5°  -66.2°  111.8°  -22.8°  155.5°  -24.4°   95.6°  -44.1°   H14                                              
H15     143.0°  -53.3°  -37.4°  112.5° -119.4°  -33.2°  100.7°  -89.9°  129.5°  -53.1°  127.0°   82.6°  128.1°  151.4°   H15                                       
E16     -17.6°  124.2°  149.7°  -54.5°   57.7°  156.1°  -72.9°   90.2°  -62.9°  112.4°  -68.4°  -81.2°  -72.9°  -45.0° -158.6°   E16                                
H17    -110.3°   74.3°   71.0° -139.2°  -66.6°   73.3°  134.7°  -58.3°   83.1° -103.1°   74.1°  168.5°   29.5°   73.4° -105.4°   92.8°   H17                         
H18    -156.6°  -36.4°  -15.5°  134.1° -103.8°  -11.9°  121.8°  -71.9°  136.0°  -49.4°  129.3° -103.8°  111.3°  149.9°  -21.9° -160.1°  -85.2°   H18                  
E19     -25.6° -120.9° -142.4°   27.3°  -80.3° -144.3°   51.2°  106.6°  -80.3°   92.5°  -89.8°   41.2° -114.1°  -75.2°  117.5°  -42.5° -134.9° -133.8°   E19           
H20    -135.1°  -64.0°   48.6°  101.7° -128.4°  -44.0°   89.3° -100.5°  121.7°  -59.5°  121.2°  -72.5°  133.6° -144.5°   11.4° -152.4°  114.6°   33.1°  109.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1z7af_ :    (ILE27)  (PRO302)   [view usage] : c.6.2.6 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |PA1517-like |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d3cl6a_ :    (GLY65)  (ALA299)   [view usage] : c.6.2.6 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |PA1517-like |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d1z7aa1 :    (ILE27)  (PRO302)   [view usage] : c.6.2.6 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |PA1517-like |Hypothetical protein PA1517 |Pseudomonas aeruginosa [TaxId: 287]
 d3s6oa_ :    (VAL29)  (PRO306)   [view usage] : c.6.2.6 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |PA1517-like |automated matches |Burkholderia pseudomallei [TaxId: 28450]
 d1z7ac_ :    (ILE27)  (ARG299)   [view usage] : c.6.2.6 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |PA1517-like |automated matches |Pseudomonas aeruginosa [TaxId: 208964]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.6