Protein Concepts Dictionary

Tableau information

Concept source:  d3dfsd_  amino acid (a.a.) range (GLY74)(GLY340)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: EHHEEEHEHHEHEHHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY74)   (PHE79) E1
	   (PHE79)   (GLN85) H2
	   (PRO92)  (GLY101) H3
	  (VAL103)  (LYS107) E4
	  (GLY111)  (GLY117) E5
	  (GLU121)  (LEU127) E6
	  (LEU130)  (GLY141) H7
	  (ASP143)  (GLY154) E8
	  (GLY154)  (SER159) H9
	  (SER159)  (GLY181) H10
	  (VAL183)  (GLU189) E11
	  (ASP197)  (HIS220) H12
	  (THR226)  (ASN231) E13
	  (SER244)  (THR252) H14
	  (VAL253)  (THR259) H15
	  (THR265)  (SER271) E16
	  (SER275)  (CYS289) H17
	  (ALA296)  (GLY302) E18
	  (SER308)  (GLY314) H19
	  (LEU320)  (GLY340) H20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                          
H2      110.5°   H2                                                                                                                                   
H3      168.2°   80.8°   H3                                                                                                                            
E4      -28.1° -138.6°  140.4°   E4                                                                                                                     
E5       71.2°  165.6°  -98.8°   44.7°   E5                                                                                                              
E6       92.1°  -35.1°  -99.4°  116.4°  132.1°   E6                                                                                                       
H7      128.6°   31.6°  -59.8°  149.6° -156.4°   66.2°   H7                                                                                                
E8      -73.6°  158.6°   94.5°  -47.8°  -35.6° -163.4°  129.4°   E8                                                                                         
H9       91.4°  -65.1°  -96.8°  104.0°  100.8°  -33.2°  -92.2°  136.3°   H9                                                                                  
H10     108.8°  -19.8°  -83.0°  134.8°  145.9°   19.2°  -48.2° -177.3°  -45.5°   H10                                                                          
E11     -70.3°  146.7°   98.4°  -48.3°  -47.7°  161.8°  120.9°  -13.2°  146.8°  166.2°   E11                                                                   
H12      84.7°  -65.9° -103.7°   98.8°  100.5°  -31.9°  -94.8°  135.2°    7.0°  -46.9°  144.1°   H12                                                            
E13     -74.7°  124.4°   96.3°  -61.1°  -69.9°  149.6°  100.6°  -34.9°  165.1°  144.1°  -22.2°  159.1°   E13                                                     
H14      79.4°  -91.9° -104.3°   82.4°   74.2°  -58.5° -118.5°  109.4°  -26.9°  -72.4°  120.1°  -26.6°  140.8°   H14                                              
H15      85.6°  -90.9°  -98.1°   87.3°   74.9°  -58.9° -115.5°  110.5°  -26.0°  -71.1°  122.0°  -27.4°  143.6°   -6.3°   H15                                       
E16     -58.3°  107.5°  115.9°  -57.7°  -85.7°  123.7°   94.7°  -55.8°  145.4°  124.3°  -42.9°  138.5°  -26.7°  137.3°  143.1°   E16                                
H17     135.0°  -93.6°  -44.2°  118.5°   76.7°  -86.6°  -91.6°   97.5°  -64.4°  -81.6°  109.1°  -70.9°  122.2°  -61.7°  -55.6°  148.9°   H17                         
E18     -33.0°   90.2°  148.6°  -53.0°  -97.0°   89.6°   97.9°  -82.9°  106.7°   98.6°  -73.1°   99.8°  -64.3°  106.0°  112.2°  -38.8°  167.3°   E18                  
H19     -62.4°   62.5°  123.2°  -84.0° -127.1°   75.0°   67.0° -104.5°  104.0°   76.0°  -92.0°   98.9°  -74.6°  117.8°  122.5°  -49.3° -156.0°  -31.1°   H19           
H20     124.3° -114.0°  -49.7°  101.6°   57.6° -105.8° -106.6°   76.7°  -79.0° -102.4°   88.7°  -84.6°  104.2°  -67.7°  -62.6°  130.5°  -20.9°  154.6°  172.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2quud_ :    (GLY74)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
 d3dfpd_ :    (GLY74)  (TRP313)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
 d3dfsd_ :    (GLY74)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
 d3dfnd_ :    (GLY74)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
 d3dfod_ :    (GLY74)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
 d2qutd_ :    (GLY74)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
 d3dfqd_ :    (GLY74)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
 d1zaha1 :    (GLY74)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
 d1j4ea_ :    (GLY74)  (GLY340)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1