Protein Concepts Dictionary

Tableau information

Concept source:  d1hp4a1  amino acid (a.a.) range (ARG154)(SER387)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: EHEEHEHEHHHHEHHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG154)  (VAL160) E1
	  (GLY166)  (LYS181) H2
	  (ASN183)  (HIS188) E3
	  (GLN193)  (ILE197) E4
	  (ARG204)  (GLY210) H5
	  (GLY217)  (TYR222) E6
	  (THR223)  (HIS238) H7
	  (GLU240)  (ASP246) E8
	  (ASP246)  (THR251) H9
	  (ASN252)  (TYR258) H10
	  (TYR258)  (CYS263) H11
	  (VAL287)  (THR303) H12
	  (ARG306)  (GLY311) E13
	  (PRO319)  (VAL330) H14
	  (PRO332)  (GLY338) H15
	  (THR340)  (TRP344) E16
	  (TRP344)  (ALA350) H17
	  (GLY355)  (TRP361) E18
	  (ALA369)  (GLY381) H19
	  (GLY383)  (SER387) E20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                          
H2      162.3°   H2                                                                                                                                   
E3      -29.8°  141.6°   E3                                                                                                                            
E4      111.6°  -85.4° -124.9°   E4                                                                                                                     
H5      -75.9°   87.3°   78.7° -146.1°   H5                                                                                                              
E6     -132.3°  -65.4° -133.9°  -24.5°  147.4°   E6                                                                                                       
H7      155.8°  -16.9°  152.6°  -81.2°   82.3°  -66.4°   H7                                                                                                
E8      -46.8°  124.7°  -17.3° -132.2°   78.0° -131.8°  137.9°   E8                                                                                         
H9      -28.7°  133.7°  -35.4° -138.0°   48.4° -160.8°  130.7°  -44.8°   H9                                                                                  
H10      37.3° -158.4°   44.7°  -80.9°  113.2°  -96.7° -162.1°  -57.7°  -65.2°   H10                                                                          
H11    -114.7°   56.5°  -86.1°  119.5°  -82.6°   95.6°  -72.0°  -68.8°  -98.6° -117.2°   H11                                                                   
H12     121.4°  -63.7°  151.0°   55.7°  -91.5°   61.1°  -48.1°  165.6°  120.9°  119.7° -120.0°   H12                                                            
E13     -54.4°  110.2°  -36.1° -160.6°   49.8° -154.9°  117.0°  -28.8°   34.0°  -80.7°  -64.6°  141.3°   E13                                                     
H14     110.2°  -85.7°  128.6°   10.3° -136.0°  -31.5°  -78.6°  138.9°  133.6°   83.8°  126.9°  -47.0°  164.1°   H14                                              
H15     107.0°  -86.8°  130.6°   22.9° -123.7°  -42.1°  -76.5°  144.6°  126.0°   87.0°  135.4°  -37.6°  160.0°   12.6°   H15                                       
E16     -69.9°   92.6°  -60.4°  172.0°   25.9°  157.0°   94.7°  -54.8°   42.0° -103.1°  -65.0°  116.6°  -26.0°  161.9°  149.4°   E16                                
H17     106.4°  -80.1°   82.1°  -81.0°  130.1°  -65.0°  -95.7°   70.7°  115.5°  -81.3°   50.4° -123.6°   90.0°  -91.2° -103.7°  106.3°   H17                         
E18     -68.3°   94.7°  -70.9°  150.1°    8.0°  155.3°   90.2°  -71.1°  -40.5° -105.5°  -84.1°   97.6°  -43.7°  139.8°  127.2°  -22.3° -128.6°   E18                  
H19     122.5°  -75.0°  130.3°  -12.7° -149.0°  -11.8°  -73.4°  133.0° -150.0°   89.0°  107.1°  -57.9°  160.8°  -20.5°  -32.1° -167.6°   72.3° -155.5°   H19           
E20     -60.7°  104.5°  -73.3°  133.2°  -21.7°  148.6°   95.4°  -79.1°  -38.2°   97.0° -103.0°   87.5°  -55.8°  123.2°  110.8°  -40.0° -145.3°  -19.0° -142.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4c7ga2 :   (ARG142)  (LEU374)   [view usage] : c.1.8.6 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-N-acetylhexosaminidase catalytic domain |automated matches |Streptomyces coelicolor [TaxId: 1902]
 d4c7da2 :   (ARG142)  (LEU374)   [view usage] : c.1.8.6 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-N-acetylhexosaminidase catalytic domain |automated matches |Streptomyces coelicolor [TaxId: 1902]
 d1m03a1 :   (ARG154)  (SER387)   [view usage] : c.1.8.6 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-N-acetylhexosaminidase catalytic domain |beta-N-acetylhexosaminidase |Streptomyces plicatus [TaxId: 1922]
 d1m04a1 :   (ARG154)  (SER387)   [view usage] : c.1.8.6 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-N-acetylhexosaminidase catalytic domain |beta-N-acetylhexosaminidase |Streptomyces plicatus [TaxId: 1922]
 d1hp4a1 :   (ARG154)  (SER387)   [view usage] : c.1.8.6 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-N-acetylhexosaminidase catalytic domain |beta-N-acetylhexosaminidase |Streptomyces plicatus [TaxId: 1922]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1