Protein Concepts Dictionary

Tableau information

Concept source:  d3qpbf_  amino acid (a.a.) range (TYR24)(LYS257)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: EHEEEHEEEHEHEEHHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR24)   (ASP30) E1
	   (ASP30)   (GLU39) H2
	   (ASN43)   (ALA48) E3
	   (GLU52)   (GLY58) E4
	   (GLU63)   (SER69) E5
	   (GLY73)   (GLY88) H6
	   (THR91)  (GLY100) E7
	  (ASP109)  (ALA113) E8
	  (THR114)  (MET119) E9
	  (GLY121)  (ALA127) H10
	  (GLU130)  (ALA135) E11
	  (LEU137)  (GLY151) H12
	  (THR153)  (GLY157) E13
	  (GLY157)  (ASP163) E14
	  (ALA164)  (GLU170) H15
	  (VAL176)  (GLY191) H16
	  (GLU198)  (LEU209) H17
	  (VAL211)  (PHE217) E18
	  (GLN223)  (GLY229) H19
	  (GLU239)  (LYS257) H20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                          
H2      138.3°   H2                                                                                                                                   
E3      -59.2°  159.4°   E3                                                                                                                            
E4      144.9°    7.1°  152.4°   E4                                                                                                                     
E5      -18.7°  156.6°  -42.6°  163.4°   E5                                                                                                              
H6      156.5°  -42.9°  116.4°  -36.0°  155.9°   H6                                                                                                       
E7      -29.3°  121.2°  -79.3°  128.2°  -38.1°  163.9°   E7                                                                                                
E8      117.6° -104.0°   59.4°  -97.2°   99.3°  -67.6°  126.9°   E8                                                                                         
E9       42.5° -171.6°  -16.7° -167.1°   26.0° -131.7°   63.6°  -75.6°   E9                                                                                  
H10     143.3°  -78.3°   85.1°  -71.7°  124.8°  -46.3° -144.6°  -25.8° -101.4°   H10                                                                          
E11    -104.2°   38.2° -143.9°   42.6° -122.5°   64.9° -100.7° -132.3°  136.9°  110.3°   E11                                                                   
H12     -74.5°   64.2° -133.3°   71.1°  -92.4°  103.1°  -61.4° -167.2°  116.9°  141.6°   40.6°   H12                                                            
E13      95.1° -126.1°   41.8° -120.0°   76.4°  -92.6°  102.1°  -24.9°   55.6°  -48.7° -157.1° -161.4°   E13                                                     
E14      54.2° -141.7°  -30.0° -138.6°   46.7° -109.3°   82.7°  -77.3°  -29.9°  -99.2°  114.0°  114.9°  -67.9°   E14                                              
H15     -63.5°   93.5° -106.3°   99.6°  -70.3° -133.8°  -34.2°  127.1°   93.3°  126.6°  -90.7°  -52.6°  109.1°  116.5°   H15                                       
H16    -135.7°   26.3°  155.8°   28.6° -145.7°   58.4° -108.7°   99.7°  161.9°   75.4°  -58.7°  -67.5°  114.2°  167.0°  -75.5°   H16                                
H17     152.7°  -67.8°   93.6°  -60.8°  135.6°  -31.9° -159.0°  -37.0° -110.3°   14.6°   96.6°  131.9°  -61.5° -101.1°  134.6°   70.7°   H17                         
E18     -43.1°   97.2° -102.0°  104.3°  -59.6°  136.7°  -28.4°  155.3°   85.2° -163.8°  -72.4°  -33.8°  130.4°   93.8°  -37.6°  -93.7° -164.2°   E18                  
H19     -41.5°  107.9°  -92.7°  114.8°  -51.7°  150.8°  -13.7°  135.0°   77.2° -145.4°  -91.5°  -51.0°  111.2°   95.6°  -22.8°  -95.3° -156.5°  -21.8°   H19           
H20     162.6°  -58.8°  103.4°  -52.0°  144.5°  -28.7°  156.3°  -45.2° -120.1°   19.9°   90.7°  122.8°  -68.6° -111.7°  126.2°   60.1°  -10.6°  153.7°  148.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3qpbg_ :    (TYR24)  (LYS257)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301450]
 d3qpbd_ :    (TYR24)  (ASN255)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301450]
 d3qpbf_ :    (TYR24)  (LYS257)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301450]
 d3qpbc_ :    (TYR24)  (LYS257)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301450]
 d3qpbj_ :    (TYR24)  (ASP256)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301450]
 d3qpba_ :    (TYR24)  (LYS257)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301450]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.56