Protein Concepts Dictionary

Tableau information

Concept source:  d1zlqb_  amino acid (a.a.) range (ILE6)(GLY219)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEEEEHHEEHEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ILE6)   (PRO11) E1
	   (MET27)   (VAL33) H2
	   (VAL33)   (LEU37) E3
	   (LEU37)   (ALA42) E4
	   (GLY44)   (PRO48) E5
	   (LYS52)   (SER57) E6
	   (LYS61)   (THR66) E7
	   (ASP70)   (PHE73) E8
	   (GLY76)   (ALA81) E9
	   (ALA81)   (ARG95) H10
	  (GLU102)  (ILE107) H11
	  (VAL108)  (SER114) E12
	  (THR116)  (LEU122) E13
	  (PRO128)  (LEU135) H14
	  (ALA158)  (THR162) E15
	  (PRO164)  (LEU172) E16
	  (ASP176)  (ARG180) E17
	  (LYS192)  (VAL198) E18
	  (ASP201)  (GLY212) H19
	  (ASP215)  (GLY219) E20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                          
H2     -141.5°   H2                                                                                                                                   
E3       85.8°  -72.4°   E3                                                                                                                            
E4       85.7° -126.6°   94.8°   E4                                                                                                                     
E5     -125.9°   27.2°  -89.3°  148.4°   E5                                                                                                              
E6       48.7°  101.2°  -37.8°  -97.1°  105.0°   E6                                                                                                       
E7     -152.9°  -49.1°  118.1°  103.6°   48.3°  150.2°   E7                                                                                                
E8      -42.0°  144.7° -127.8°   84.1° -117.5°  -90.3° -112.7°   E8                                                                                         
E9       59.1°  -99.5°  -28.0°  -84.4° -111.3°   17.4° -146.1°  100.8°   E9                                                                                  
H10     -16.7°  157.5°  -98.3°   73.7° -136.6°  -63.1°  143.5°   31.4°  -70.4°   H10                                                                          
H11     -95.9°   45.6°   55.7°  150.2°  -41.5°   63.6°  -88.5° -116.6°   71.2° -112.1°   H11                                                                   
E12    -157.4°   22.2°   92.5°  116.9°  -31.5°  123.3°  -27.1° -134.2°  120.3° -164.3°   65.1°   E12                                                            
E13      24.3° -142.6°  -72.0°  -67.8° -142.2°  -41.8°  168.0°   59.3°   44.1°  -27.9°  103.0°  164.3°   E13                                                     
H14    -101.9°   92.4°  162.5° -101.3°   73.4°  143.8°  -51.5°   61.3°  160.0°   92.6° -107.5°  -74.3°  120.4°   H14                                              
E15     121.3°  -65.0°   47.8°  -68.5°   92.2°  -82.2°   85.7° -150.3°  -66.4° -124.1°   85.6°   71.6°  -98.2° -133.6°   E15                                       
E16     -53.7° -135.7° -139.2°   87.5° -109.4° -101.5° -100.6°   12.1°  112.8°   43.5° -117.4° -122.5°   71.4°  -49.2°  156.0°   E16                                
E17     143.9°   29.1°  -58.3°  -99.9°   56.4°   95.2°   60.5°  172.7°  -85.7° -155.7°   62.2°   38.5° -127.8°  111.7°  -36.0°  160.8°   E17                         
E18     -27.3° -160.2°  110.6°   73.2° -134.0°  -75.2° -131.2°  -20.2°   82.7°   12.3° -118.8° -154.4°   39.7°  -80.7°  132.3°  -31.9°  167.1°   E18                  
H19     168.0°   49.8° -104.2°  -86.8°   61.9° -141.9°   23.5°  127.8° -129.3°  151.4°   95.3°   31.3° -153.5°   70.5°  -64.0°  116.6°  -47.0°  140.9°   H19           
E20     -38.1°  115.9°   48.1°   85.1° -119.6°  -15.1°  165.0°  -80.0°   21.0°  -50.4°   78.3°  137.9°  -26.8° -139.5°   86.2°  -91.8°  106.3°  -62.7° -150.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3mvwb_ :     (ILE6)  (GLY219)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
 d3qimb_ :     (ASP4)  (GLY219)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
 d3dp8a_ :     (ILE6)  (ASN220)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
 d1zlqb_ :     (ILE6)  (GLY219)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
 d3mvxa_ :     (ILE6)  (ASN220)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.94