Protein Concepts Dictionary

Tableau information

Concept source:  d1f4ba_  amino acid (a.a.) range (GLY31)(HIS255)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: EEHHHEEHEHEEEHEEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY31)   (ASN37) E1
	   (LYS48)   (LEU52) E2
	   (LEU52)   (GLY65) H3
	   (ALA70)   (ASN76) H4
	   (TYR94)   (ARG99) H5
	   (ARG99)  (THR103) E6
	  (GLY106)  (ILE112) E7
	  (ILE112)  (ASP122) H8
	  (ILE128)  (ALA132) E9
	  (ASN134)  (MET141) H10
	  (ALA148)  (VAL154) E11
	  (LYS158)  (TYR164) E12
	  (ARG166)  (ASP169) E13
	  (ASP169)  (CYS192) H14
	  (ASP198)  (GLY204) E15
	  (GLY204)  (TYR209) E16
	  (MET213)  (SER221) H17
	  (LYS229)  (ARG234) E18
	  (ASP246)  (GLY251) E19
	  (GLY251)  (HIS255) E20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                          
E2      -73.4°   E2                                                                                                                                   
H3     -100.0°  -38.2°   H3                                                                                                                            
H4       59.1°  115.0°  152.9°   H4                                                                                                                     
H5      -65.2°  -49.9°  -42.6°  124.0°   H5                                                                                                              
E6     -140.3°   75.7°   41.7° -160.0°  -75.9°   E6                                                                                                       
E7       50.8° -123.9° -137.9°  -43.2°  -95.4°  145.8°   E7                                                                                                
H8      -55.3°  -93.7°  -86.8°   93.2°   47.2°  103.2°  -52.5°   H8                                                                                         
E9      127.6°   96.8°  101.8°  -81.8°  142.7°   80.0° -119.9° -169.5°   E9                                                                                  
H10      98.8°  102.4°  125.0°  -51.0°  150.0°  111.6°  -92.5° -144.2°  -31.7°   H10                                                                          
E11     -38.2°  -81.3°  -85.5°   86.1°  -43.0° -112.9°   52.5°  -18.5°  165.7°  134.7°   E11                                                                   
E12     160.1°  106.9°   90.7° -105.0°  130.7°   55.0° -127.3°  142.8°  -32.7°  -61.4°  161.0°   E12                                                            
E13      92.7°  121.9°  147.8°  -35.2° -157.5°  125.0°  -71.8° -124.2°   48.5°  -22.9° -120.8°   70.0°   E13                                                     
H14     -45.0°  -43.6°  -56.0°  103.9°  -22.9°  -95.3°  -86.2°  -51.1°  139.1°  130.0°  -37.8°  146.1°  134.8°   H14                                              
E15     167.1°  107.1°   87.0° -110.7°  125.3°   49.4° -128.5°  136.5°  -39.7°  -68.4°  154.3°   -7.0°  -76.1°  143.0°   E15                                       
E16      94.9°  121.2°  145.6°  -37.7° -159.3°  122.5°  -74.3° -126.7°   46.0°   21.0° -123.4°   67.6°   -2.6° -136.5°   73.7°   E16                                
H17      35.3° -100.0° -109.3°   64.8°  -66.8° -132.3°   28.8°  -29.1°  146.4°  115.6°  -23.8° -153.0°   98.1°   58.5° -151.1° -100.7°   H17                         
E18     -69.8°   -7.5°  -45.5°  107.8°  -55.1°  -81.8° -120.6°  -96.6°   93.8°   96.2°  -82.6°  107.8°  114.9°  -45.6°  109.0°  114.4°   99.1°   E18                  
E19      91.4° -164.4°  146.9°  -57.2°  120.8°  116.3°   40.7°   74.3°  -95.3°  -83.0°   84.5°  -88.6°  -61.0°  122.2°  -88.5°  -62.3°   64.7°  160.9°   E19           
E20     142.0° -134.5°  117.6°  -83.4°  149.9°   77.6°   98.5°  128.1°  -42.3°  -55.8°  143.5°  -28.8°  -52.5°  172.6°  -31.0°  -50.7°  125.1° -133.9°   60.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2vf0a_ :    (HIS32)  (PRO256)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d1f4ba_ :    (GLY31)  (HIS255)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d2ftna_ :    (GLY31)  (PRO256)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d4foad_ :    (ARG27)  (HIS254)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d3bfia_ :    (GLY31)  (PRO256)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d1f4da_ :    (GLY31)  (PRO256)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d1bjga_ :    (GLY31)  (HIS255)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.117