Protein Concepts Dictionary

Tableau information

Concept source:  d1u7hb_  amino acid (a.a.) range (ALA87)(ASP321)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: EEHEHEHEHEEHEHHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA87)   (ASP93) E1
	  (VAL100)  (THR106) E2
	  (THR106)  (LEU124) H3
	  (ARG130)  (GLY136) E4
	  (SER141)  (GLY153) H5
	  (GLU155)  (THR162) E6
	  (PRO164)  (SER178) H7
	  (GLY179)  (ARG184) E8
	  (SER187)  (LYS193) H9
	  (ASP196)  (THR202) E10
	  (GLY219)  (VAL225) E11
	  (ASP238)  (ALA243) H12
	  (ARG244)  (GLU248) E13
	  (GLU250)  (GLU256) H14
	  (GLY257)  (LEU262) H15
	  (PHE266)  (LEU271) E16
	  (LEU271)  (GLY277) H17
	  (GLN287)  (SER293) E18
	  (ALA297)  (GLY315) H19
	  (MSE316)  (ASP321) E20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                          
E2      159.4°   E2                                                                                                                                   
H3       81.0°  -78.9°   H3                                                                                                                            
E4      110.8°  -87.9°  141.6°   E4                                                                                                                     
H5       61.8°   98.9°  -37.6°  171.9°   H5                                                                                                              
E6      122.1°  -74.0°  125.1°  -18.2°  162.6°   E6                                                                                                       
H7      -56.2°  113.0°  -73.1°  144.4°  -35.6°  161.8°   H7                                                                                                
E8      135.0°  -55.9°  104.8°  -40.8°  141.7°  -22.7° -168.6°   E8                                                                                         
H9      -52.6°  109.8°  -50.7° -161.7°  -13.8° -172.0°   23.7°  155.4°   H9                                                                                  
E10     101.2°  -98.7°  153.3°  -14.2°  161.7°  -32.4°  130.4°  -55.0°  148.4°   E10                                                                          
E11      88.1° -112.5°  161.4°  -31.9°  144.7°  -50.1°  113.0°  -72.7°  131.0°  -17.7°   E11                                                                   
H12     -42.8°  117.8°   48.3° -153.5°   19.0° -159.1°   33.2°  150.4°   13.0° -143.4° -127.9°   H12                                                            
E13      64.4° -135.3°  145.3°  -61.0°  115.4°  -79.1°   84.8° -101.8°  101.7°  -46.9°  -29.3°  -99.7°   E13                                                     
H14     165.5°  -31.5° -105.0°   56.4° -130.4°   43.7° -137.9°  -31.1° -141.0°   67.5°   82.5°  149.1°  109.3°   H14                                              
H15     104.7°  -69.7°  -63.1°   78.4°  -99.8°   63.0° -134.9°   47.2° -111.2°   90.9°  105.8° -103.4° -126.5°  -67.8°   H15                                       
E16     -59.5°  120.8°  101.4° -116.3°   63.8° -133.5°   28.3° -151.8°   51.2° -102.6°  -85.7°   57.7°  -59.5°  130.2° -160.7°   E16                                
H17     -61.3°  102.9°   54.9° -162.8°   17.9°  176.5°  -18.5°  155.4°   11.0° -148.8° -131.2°   24.1° -102.5°  132.9°  117.7°  -46.7°   H17                         
E18      80.7° -119.9°  158.9°  -40.4°  136.0°  -58.6°  104.8°  -81.3°  122.3°  -26.3°   -8.7° -119.5°  -20.7°   90.6° -112.0°  -78.0° -122.8°   E18                  
H19     -75.3°  110.6°  117.3° -101.1°   80.6° -116.6°   45.5° -132.6°   69.1°  -88.6°  -73.7°   76.9°   53.0° -112.2° -179.5°   19.5°   62.7°  -67.5°   H19           
E20     -74.8°  120.1° -122.0°   38.9° -133.0°   47.3° -126.6°   64.3° -127.1°   36.9°   39.8° -115.6°  -53.2°   91.0°  -73.4° -109.5° -136.1°   42.0° -106.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1u7ha_ :    (ALA87)  (ASP321)   [view usage] : c.2.1.13 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Ornithine cyclodeaminase-like |Ornithine cyclodeaminase |Pseudomonas putida [TaxId: 303]
 d1x7db_ :    (ALA87)  (ASP321)   [view usage] : c.2.1.13 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Ornithine cyclodeaminase-like |Ornithine cyclodeaminase |Pseudomonas putida [TaxId: 303]
 d1x7da_ :    (ALA87)  (ASP321)   [view usage] : c.2.1.13 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Ornithine cyclodeaminase-like |Ornithine cyclodeaminase |Pseudomonas putida [TaxId: 303]
 d1u7hb_ :    (ALA87)  (ASP321)   [view usage] : c.2.1.13 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Ornithine cyclodeaminase-like |Ornithine cyclodeaminase |Pseudomonas putida [TaxId: 303]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2