Protein Concepts Dictionary

Tableau information

Concept source:  d3su6a_  amino acid (a.a.) range (MET986)(MET1179)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEEEEEEEEEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (MET986)  (VAL992) E1
	  (VAL995) (LEU1000) E2
	 (TYR1006) (ARG1011) E3
	 (GLU1013) (THR1022) H4
	 (GLY1023) (ASN1027) E5
	 (ASN1027) (GLY1031) E6
	 (GLN1034) (ALA1039) E7
	 (PHE1043) (ASN1049) E8
	 (GLY1050) (VAL1055) E9
	 (THR1061) (PRO1067) E10
	 (GLY1069) (TYR1075) E11
	 (ASP1081) (GLN1086) E12
	 (GLY1090) (PRO1096) E13
	 (ASP1103) (THR1108) E14
	 (ALA1111) (GLY1120) E15
	 (SER1122) (SER1128) E16
	 (GLY1140) (CYS1145) E17
	 (ARG1155) (THR1160) E18
	 (LYS1165) (ILE1170) E19
	 (GLU1173) (MET1179) H20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                          
E2      -23.2°   E2                                                                                                                                   
E3      145.8°  162.2°   E3                                                                                                                            
H4      122.9°  110.9°   61.0°   H4                                                                                                                     
E5      -23.4°  -46.6°  125.2°  132.1°   E5                                                                                                              
E6       47.1°   24.3° -161.1° -100.8°   70.0°   E6                                                                                                       
E7      158.2°  157.3°  -40.4°  -78.9°  140.4° -136.4°   E7                                                                                                
E8      -64.3°  -59.2°  105.1°   58.9°  -75.5°  -65.6°  137.1°   E8                                                                                         
E9      118.4°  108.9°  -88.9° -105.5°  121.2°   91.5°  -48.4°  146.4°   E9                                                                                  
E10     -62.0°  -83.8°   84.1°  108.0°  -41.9° -108.1°  113.4°  -76.2°  136.6°   E10                                                                          
E11      79.7°   56.6° -130.3°  -78.3°  102.8°   32.8° -108.3°   72.6°  -75.1°  138.3°   E11                                                                   
E12     -75.3°  -91.0°   72.2°   79.4°  -62.8° -111.5°  111.2°  -56.8°  155.4°  -28.8°  129.2°   E12                                                            
E13      75.4°   52.5° -135.8°  -84.7°   98.1°   28.3° -110.6°  -75.2°   73.6° -135.8°   -6.4° -131.0°   E13                                                     
E14     129.3°  151.4°  -33.1°  -93.9°  106.1°  162.9°  -38.7°  130.6°  -76.1°   74.9° -146.8°   79.5° -148.1°   E14                                              
E15     -94.4°  -71.5°  111.9°  -59.0° -117.8°  -49.8°   98.7°  -67.4°   79.0° -142.8°  -19.7° -122.2°  -26.1°  136.1°   E15                                       
E16      59.4°   73.0° -114.2°  174.6°   47.8°   84.2°  -98.8°  122.5°  -76.0°   68.3° -107.1°   97.1°  100.7°  -81.4°  126.4°   E16                                
E17     -26.2°   -5.7°  158.0°  105.3°  -49.5°   23.9° -159.8°   53.8°  112.2°  -84.5°   54.7°  -89.0°   51.3°  155.4°  -68.3°   78.6°   E17                         
E18      85.0°   76.6° -121.1° -127.3°   92.1°   64.2°  -81.2°  129.5°  -33.6°  124.7°  -62.7°  153.1°   58.0°  -99.9°   76.8°  -56.7°   80.7°   E18                  
E19    -109.8° -108.1°   57.1°   26.2° -110.3° -109.3°   89.6°  -49.0°  128.4°  -81.8°   97.4°  -53.1° -103.3°   87.8°  -80.1°  149.9° -102.7°  153.5°   E19           
H20    -128.1° -126.7°   39.9°   25.7° -124.5° -124.0°   70.7°  -67.7°  112.3°  -88.6°  104.0°  -62.4° -110.4°   72.4°   84.6° -148.9° -121.1°  143.4°   19.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3su1a_ :   (MET986) (MET1179)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d3m5la_ :   (MET986) (MET1179)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NS3 protease |Hepatitis c virus subtype 1a [TaxId: 31646]
 d3su5a_ :   (MET986) (SER1181)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d3su6a_ :   (MET986) (MET1179)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d4wh8a_ :   (MET986) (MET1179)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d3sv6a_ :   (MET986) (ARG1180)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d3su3a_ :   (MET986) (THR1178)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d3su2a_ :   (MET986) (MET1179)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d3su0a_ :   (MET986) (MET1179)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47