Protein Concepts Dictionary

Tableau information

Concept source:  d3sbpg1  amino acid (a.a.) range (TYR219)(GLY415)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: EEEEHHEHEEEEEHHEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (TYR219)  (ASP223) E1
	  (ALA230)  (ASP236) E2
	  (ASP240)  (ALA244) E3
	  (ARG249)  (THR254) E4
	  (CYS255)  (LYS260) H5
	  (ASP263)  (ARG269) H6
	  (TRP274)  (ILE280) E7
	  (ILE280)  (GLY290) H8
	  (PRO301)  (LYS307) E9
	  (PHE315)  (PRO320) E10
	  (HIS326)  (THR330) E11
	  (PHE337)  (GLY341) E12
	  (PRO345)  (ALA351) E13
	  (ALA351)  (GLY361) H14
	  (ASP365)  (VAL371) H15
	  (VAL371)  (GLY377) E16
	  (LEU381)  (GLY387) E17
	  (GLY389)  (THR394) E18
	  (SER399)  (ASN405) E19
	  (ASN405)  (GLY415) H20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                          
E2      172.7°   E2                                                                                                                                   
E3      -45.8°  128.4°   E3                                                                                                                            
E4      137.7°  -45.0°  157.8°   E4                                                                                                                     
H5      131.9°  -54.7° -132.8°   65.0°   H5                                                                                                              
H6      -83.8°   90.7°   38.0° -131.0°  110.8°   H6                                                                                                       
E7      -31.4°  149.3°  -39.6°  159.1°  109.2°   69.8°   E7                                                                                                
H8      -68.9°  117.3°  -89.1°  112.9°   63.0°  105.5°  -51.0°   H8                                                                                         
E9      151.1°  -21.7°  108.5°  -59.5°  -73.5°   72.3°  140.1°  132.5°   E9                                                                                  
E10     136.8°  -39.2°  121.8°  -37.2°  -88.5°  -96.8°  160.6° -148.4°  -36.4°   E10                                                                          
E11     -43.7°  130.3°    3.5°  155.9°  136.1°   40.4°  -40.1°  -90.3°  109.9°  120.9°   E11                                                                   
E12     143.0°  -40.0°  158.2°    5.4°  -61.3° -127.4°  161.6°  112.6°  -55.4°  -36.5°  157.0°   E12                                                            
E13     -54.7°  123.8°  -32.4°  165.8°  101.8°   46.7°  -27.1°   61.7°  113.2°  143.5°  -35.2°  160.8°   E13                                                     
H14    -106.6°   77.8°  -99.6°   98.8°   33.9°   88.0°  -78.1°  -44.1°   88.9°  116.6° -102.7°   95.0°   68.0°   H14                                              
H15      56.0° -118.5°   62.3° -100.5° -164.9°  -81.5°   82.8°  123.5° -103.4°  -81.2°   59.0° -104.5°   93.0°  160.4°   H15                                       
E16     107.5°  -73.2°  133.2°  -32.4°  -94.0° -134.8°  137.3° -119.5°  -80.0°  -45.0°  129.8°  -37.6°  161.7° -127.0°   70.9°   E16                                
E17     -45.0°  127.9°   19.4°  140.2°  151.7°   46.1°  -52.5° -103.6°  106.2°  108.0°   16.3°  142.4°  -51.5° -118.9°   43.3°  113.9°   E17                         
E18     116.5°  -69.1°  162.3°  -31.8°  -56.6° -159.7°  127.6°   83.5°  -88.2°  -68.7°  159.7°  -34.2°  145.2°  -86.2° -109.0°  -42.2°  150.6°   E18                  
E19     -74.6°  100.6°  -29.9°  142.9°  110.5°   12.5°  -57.7°  -94.2°   83.6°  109.3°  -33.0°  139.0°  -34.3°   82.9°  -83.4°  145.1°  -42.9°  166.5°   E19           
H20    -148.3°   31.5° -108.5°   73.6°  -45.7°  -72.7° -117.9°   96.7°   36.2°   68.7° -111.6°   68.2°  -93.6°   52.7° -137.0°  104.1° -118.5°   88.3°   78.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2iwfa1 :   (TYR178)  (GLY373)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |automated matches |Achromobacter cycloclastes [TaxId: 223]
 d3sbpg1 :   (TYR219)  (GLY415)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |automated matches |Pseudomonas stutzeri [TaxId: 316]
 d1fwxa2 :   (VAL164)  (GLY358)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Paracoccus denitrificans [TaxId: 266]
 d1qnia2 :   (SER163)  (GLY358)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Pseudomonas nautica [TaxId: 2743]
 d3sbpd1 :   (TYR219)  (GLY415)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |automated matches |Pseudomonas stutzeri [TaxId: 316]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.69